Chr Y has a No-Call run of length 11 from position
2978552 to position 3026733 (48.18 Kb)
Chr Y has a No-Call run of length 35 from position
3041551 to position 3299144 (257.59 Kb)
Chr Y has a No-Call run of length 26 from position
3438029 to position 3496205 (58.18 Kb)
Chr Y has a No-Call run of length 12 from position
3557090 to position 3627909 (70.82 Kb)
Chr Y has a No-Call run of length 28 from position
3800253 to position 3966708 (166.46 Kb)
Chr Y has a No-Call run of length 21 from position
4087052 to position 4213744 (126.69 Kb)
Chr Y has a No-Call run of length 11 from position
4280688 to position 4357591 (76.90 Kb)
Chr Y has a No-Call run of length 27 from position
4400485 to position 4518978 (118.49 Kb)
Chr Y has a No-Call run of length 30 from position
4534217 to position 4672316 (138.10 Kb)
Chr Y has a No-Call run of length 18 from position
4702703 to position 4800467 (97.76 Kb)
Chr Y has a No-Call run of length 57 from position
4804521 to position 4925084 (120.56 Kb)
Chr Y has a No-Call run of length 57 from position
4927998 to position 5012099 (84.10 Kb)
Chr Y has a No-Call run of length 10 from position
5015824 to position 5034233 (18.41 Kb)
Chr Y has a No-Call run of length 20 from position
5055224 to position 5105226 (50.00 Kb)
Chr Y has a No-Call run of length 11 from position
5127976 to position 5159855 (31.88 Kb)
Chr Y has a No-Call run of length 28 from position
5210582 to position 5287617 (77.03 Kb)
Chr Y has a No-Call run of length 31 from position
5291619 to position 5357573 (65.95 Kb)
Chr Y has a No-Call run of length 23 from position
5382696 to position 5434873 (52.18 Kb)
Chr Y has a No-Call run of length 50 from position
5458035 to position 5574967 (116.93 Kb)
Chr Y has a No-Call run of length 24 from position
5577743 to position 5672315 (94.57 Kb)
Chr Y has a No-Call run of length 14 from position
5789456 to position 5897758 (108.30 Kb)
Chr Y has a No-Call run of length 15 from position
6006768 to position 6188857 (182.09 Kb)
Chr Y has a No-Call run of length 13 from position
6739767 to position 6739858 ( 0.09 Kb)
Chr 1 has a ROH of length 234 from position
155135335 to position 156063880 ( 0.93 Mb)
Chr 2 has a ROH of length 245 from position
47572160 to position 47657079 ( 0.08 Mb)
Chr 2 has a ROH of length 238 from position
48010410 to position 48174199 ( 0.16 Mb)
Chr 2 has a ROH of length 220 from position
127895655 to position 128189308 ( 0.29 Mb)
Chr 3 has a ROH of length 506 from position
36994234 to position 37458845 ( 0.46 Mb)
Chr 3 has a ROH of length 257 from position
83970229 to position 86166548 ( 2.20 Mb)
Chr 7 has a ROH of length 282 from position
44148920 to position 44192022 ( 0.04 Mb)
Chr 11 has a ROH of length 259 from position
5247802 to position 5255790 ( 0.01 Mb)
Chr 12 has a ROH of length 234 from position
20963135 to position 21523625 ( 0.56 Mb)
Chr 12 has a ROH of length 467 from position
103133466 to position 103341908 ( 0.21 Mb)
Chr 13 has a ROH of length 227 from position
32911934 to position 32918792 ( 0.01 Mb)
Chr 13 has a ROH of length 315 from position
48746463 to position 49109054 ( 0.36 Mb)
Chr 15 has a ROH of length 867 from position
48252038 to position 48992897 ( 0.74 Mb)
Chr 16 has a ROH of length 413 from position
2126489 to position 2166876 ( 0.04 Mb)
Chr 17 has a ROH of length 734 from position
40983813 to position 41501295 ( 0.52 Mb)
Chr 19 has a ROH of length 558 from position
10987013 to position 11242658 ( 0.26 Mb)
Chr 22 has a ROH of length 256 from position
29913272 to position 30609096 ( 0.70 Mb)
Total ROH Mb: 7.57
Total genome Mb: 3003.11
The detected ROHs account for 0.252 % of the reported genome.
[h=2]The following percentages are for individual homozygous SNPs, not just those in ROHs.[/h]
Chr 1: 72.224 % (33697 of 46656 SNPs) are homozygous, 366 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 2: 70.733 % (32627 of 46127 SNPs) are homozygous, 300 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 3: 70.677 % (27222 of 38516 SNPs) are homozygous, 219 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 4: 70.004 % (23741 of 33914 SNPs) are homozygous, 252 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 5: 69.634 % (23943 of 34384 SNPs) are homozygous, 253 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 6: 72.397 % (29236 of 40383 SNPs) are homozygous, 811 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 7: 71.429 % (23608 of 33051 SNPs) are homozygous, 299 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 8: 70.416 % (21312 of 30266 SNPs) are homozygous, 214 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 9: 71.241 % (18938 of 26583 SNPs) are homozygous, 179 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 10: 70.347 % (20549 of 29211 SNPs) are homozygous, 201 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 11: 72.029 % (21119 of 29320 SNPs) are homozygous, 253 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 12: 71.610 % (20373 of 28450 SNPs) are homozygous, 217 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 13: 71.084 % (15391 of 21652 SNPs) are homozygous, 153 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 14: 70.848 % (13245 of 18695 SNPs) are homozygous, 142 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 15: 72.244 % (13207 of 18281 SNPs) are homozygous, 148 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 16: 72.690 % (13955 of 19198 SNPs) are homozygous, 190 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 17: 75.815 % (14185 of 18710 SNPs) are homozygous, 215 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 18: 71.231 % (11746 of 16490 SNPs) are homozygous, 107 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 19: 76.403 % ( 9924 of 12989 SNPs) are homozygous, 209 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 20: 70.898 % (10276 of 14494 SNPs) are homozygous, 95 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 21: 69.744 % ( 5901 of 8461 SNPs) are homozygous, 62 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr 22: 71.548 % ( 6508 of 9096 SNPs) are homozygous, 85 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr X: 2.577 % ( 502 of 19478 SNPs) are homozygous, 287 No-Calls, 0 heterozygous SNPs treated as homozygous
Chr Y: 2302 SNPs, 990 No-Calls, 0 heterozygous SNPs treated as homozygous
mtDNA : 5095 SNPs, 230 No-Calls, 0 heterozygous SNPs treated as homozygous
Total autosomal (Chr 1-22): 0.864 % ( 4970 of 574927 SNPs) are NoCalls
Total autosomal (Chr 1-22): 28.564 % (164224 of 574927 SNPs) are Heterozygous (this tally excludes 0 heterozygous SNPs that were treated as homozygous)
Total autosomal (Chr 1-22): 71.436 % (410703 of 574927 SNPs) are Homozygous (this tally includes 0 heterozygous SNPs that were treated as homozygous)