PDA

View Full Version : Admixture of harra test



Sile
22-06-15, 13:26
Tested my son's AuDna to see what percent of his mother's 1 % of far east is present. seems like nearly nothing except the NE-Euro. Others seem more euro.

I do not know what Utahn-white means.


Admix Results (sorted):



#
Population
Percent


1
NE-Euro
35.62


2
Mediterranean
31.79


3
Caucasian
19.42


4
Baloch
8.18


5
SW-Asian
4.34




Finished reading population data. 377 populations found.
16 components mode.

--------------------------------

Least-squares method.

Using 1 population approximation:
1 italian @ 9.498152
2 romanian-a @ 10.924433
3 serbian @ 12.658248
4 french @ 12.962022
5 bulgarian @ 13.045597
6 tuscan @ 14.974964
7 tuscan @ 15.314530
8 spaniard @ 15.543548
9 tuscan @ 15.821586
10 hungarian @ 16.172642
11 spaniard @ 16.964069
12 slovenian @ 18.422293
13 utahn-white @ 21.121178
14 n-european @ 21.727547
15 utahn-white @ 22.636168
16 british @ 22.777712
17 ashkenazi @ 25.096226
18 orcadian @ 25.849720
19 puerto-rican @ 26.718153
20 ukranian @ 28.096972

Using 2 populations approximation:
1 50% tuscan +50% utahn-white @ 2.826233


Using 3 populations approximation:
1 50% french +25% romanian-a +25% tuscan @ 1.494231


Using 4 populations approximation:
1 italian + orcadian + romanian-a + tuscan @ 0.975738
2 italian + orcadian + romanian-a + tuscan @ 1.045656
3 italian + orcadian + romanian-a + tuscan @ 1.158805
4 bulgarian + french + french + tuscan @ 1.245187
5 bulgarian + french + french + tuscan @ 1.273891
6 bulgarian + italian + orcadian + tuscan @ 1.346085
7 british + italian + serbian + tuscan @ 1.361426
8 bulgarian + french + french + tuscan @ 1.364234
9 british + italian + romanian-a + tuscan @ 1.398766
10 british + italian + serbian + tuscan @ 1.426800
11 bulgarian + italian + orcadian + tuscan @ 1.444741
12 british + italian + serbian + tuscan @ 1.448072
13 british + italian + romanian-a + tuscan @ 1.467059
14 french + french + romanian-a + tuscan @ 1.494231
15 french + french + romanian-a + tuscan @ 1.553718
16 italian + serbian + tuscan + utahn-white @ 1.572962
17 british + italian + romanian-a + tuscan @ 1.591865
18 italian + serbian + tuscan + utahn-white @ 1.607553
19 bulgarian + italian + orcadian + tuscan @ 1.619717
20 french + n-european + tuscan + tuscan @ 1.694496

Done.

Angela
22-06-15, 15:32
Tested my son's AuDna to see what percent of his mother's 1 % of far east is present. seems like nearly nothing except the NE-Euro. Others seem more euro.

I do not know what Utahn-white means.


Admix Results (sorted):



#
Population
Percent


1
NE-Euro
35.62


2
Mediterranean
31.79


3
Caucasian
19.42


4
Baloch
8.18


5
SW-Asian
4.34




Finished reading population data. 377 populations found.
16 components mode.

--------------------------------

Least-squares method.

Using 1 population approximation:
1 italian @ 9.498152
2 romanian-a @ 10.924433
3 serbian @ 12.658248
4 french @ 12.962022
5 bulgarian @ 13.045597
6 tuscan @ 14.974964
7 tuscan @ 15.314530
8 spaniard @ 15.543548
9 tuscan @ 15.821586
10 hungarian @ 16.172642
11 spaniard @ 16.964069
12 slovenian @ 18.422293
13 utahn-white @ 21.121178
14 n-european @ 21.727547
15 utahn-white @ 22.636168
16 british @ 22.777712
17 ashkenazi @ 25.096226
18 orcadian @ 25.849720
19 puerto-rican @ 26.718153
20 ukranian @ 28.096972

Using 2 populations approximation:
1 50% tuscan +50% utahn-white @ 2.826233


Using 3 populations approximation:
1 50% french +25% romanian-a +25% tuscan @ 1.494231


Using 4 populations approximation:
1 italian + orcadian + romanian-a + tuscan @ 0.975738
2 italian + orcadian + romanian-a + tuscan @ 1.045656
3 italian + orcadian + romanian-a + tuscan @ 1.158805
4 bulgarian + french + french + tuscan @ 1.245187
5 bulgarian + french + french + tuscan @ 1.273891
6 bulgarian + italian + orcadian + tuscan @ 1.346085
7 british + italian + serbian + tuscan @ 1.361426
8 bulgarian + french + french + tuscan @ 1.364234
9 british + italian + romanian-a + tuscan @ 1.398766
10 british + italian + serbian + tuscan @ 1.426800
11 bulgarian + italian + orcadian + tuscan @ 1.444741
12 british + italian + serbian + tuscan @ 1.448072
13 british + italian + romanian-a + tuscan @ 1.467059
14 french + french + romanian-a + tuscan @ 1.494231
15 french + french + romanian-a + tuscan @ 1.553718
16 italian + serbian + tuscan + utahn-white @ 1.572962
17 british + italian + romanian-a + tuscan @ 1.591865
18 italian + serbian + tuscan + utahn-white @ 1.607553
19 bulgarian + italian + orcadian + tuscan @ 1.619717
20 french + n-european + tuscan + tuscan @ 1.694496

Done.

Utah-white means CEU. The sample was taken in Utah in the U.S., so it's a mixture of British Isles and probably some German and Scandinavian...a lot of Mormons.

RobertColumbia
11-02-16, 06:33
Here are my results:

Threshold of components set to 1.000
Threshold of method set to 0.25%
Personal data has been read. 20 approximations mode.

...

Admix Results (sorted):



#
Population
Percent


1
NE-Euro
50.12


2
Mediterranean
28.89


3
Baloch
12.11


4
Caucasian
6.81


5
SW-Asian
1.32




Finished reading population data. 377 populations found.
16 components mode.

--------------------------------

Least-squares method.

Using 1 population approximation:
1 utahn-white @ 4.314427
2 n-european @ 4.333402
3 utahn-white @ 4.463135
4 british @ 6.042053
5 orcadian @ 7.489377
6 hungarian @ 10.579130
7 slovenian @ 11.594049
8 french @ 11.793410
9 ukranian @ 16.317205
10 serbian @ 20.329966
11 belorussian @ 20.602507
12 mordovian @ 21.225517
13 russian @ 23.296566
14 russian @ 23.684668
15 spaniard @ 25.016251
16 romanian-a @ 25.174879
17 spaniard @ 26.082771
18 lithuanian @ 26.167206
19 bulgarian @ 27.822527
20 chuvash @ 28.365906

Using 2 populations approximation:
1 50% hungarian +50% orcadian @ 2.962615


Using 3 populations approximation:
1 50% orcadian +25% orcadian +25% serbian @ 1.772782


Using 4 populations approximation:
1 orcadian + orcadian + orcadian + serbian @ 1.772782
2 orcadian + orcadian + serbian + utahn-white @ 2.118028
3 british + orcadian + orcadian + serbian @ 2.149194
4 orcadian + orcadian + serbian + utahn-white @ 2.278134
5 n-european + orcadian + orcadian + serbian @ 2.424904
6 orcadian + orcadian + orcadian + romanian-a @ 2.543835
7 british + orcadian + serbian + utahn-white @ 2.686454
8 british + british + orcadian + serbian @ 2.731281
9 hungarian + orcadian + utahn-white + utahn-white @ 2.838972
10 hungarian + orcadian + utahn-white + utahn-white @ 2.859728
11 orcadian + serbian + utahn-white + utahn-white @ 2.915000
12 british + orcadian + serbian + utahn-white @ 2.931292
13 bulgarian + orcadian + orcadian + orcadian @ 2.932683
14 british + british + french + mordovian @ 2.960584
15 hungarian + hungarian + orcadian + orcadian @ 2.962615
16 british + hungarian + orcadian + utahn-white @ 2.973415
17 british + hungarian + orcadian + utahn-white @ 2.979458
18 orcadian + slovenian + utahn-white + utahn-white @ 2.989290
19 hungarian + n-european + orcadian + utahn-white @ 3.002281
20 british + hungarian + utahn-white + utahn-white @ 3.004771

FunkyWanderer
06-03-16, 15:44
I'm french Canadian, originally from France. So this seems pretty accurate




Admix Results (sorted):



#
Population
Percent


1
NE-Euro
41.49


2
Mediterranean
35.6


3
Baloch
10.04


4
Caucasian
10


5
SW-Asian
1.18


6
Papuan
0.89


7
American
0.33


8
SE-Asian
0.26


9
Beringian
0.21



Single Population Sharing:



#
Population (source)
Distance


1
french (hgdp)
2.11


2
utahn-white (1000genomes)
9.81


3
british (1000genomes)
10.67


4
utahn-white (hapmap)
11.84


5
n-european (xing)
11.85


6
spaniard (behar)
12.76


7
orcadian (hgdp)
13.52


8
hungarian (behar)
13.64


9
spaniard (1000genomes)
13.9


10
slovenian (xing)
15.65


11
italian (hgdp)
16.81


12
romanian-a (behar)
19.51


13
bulgarian (yunusbayev)
21.75


14
spain-basc (henn2012)
22.51


15
ukranian (yunusbayev)
23.36


16
tuscan (hapmap)
23.69


17
tuscan (hgdp)
24.14


18
basque (hgdp)
24.3


19
tuscan (1000genomes)
24.7


20
puerto-rican (1000genomes)
27.28



Mixed Mode Population Sharing:



#

Primary Population (source)
Secondary Population (source)
Distance


1

97.4%
french (hgdp)
+
2.6%
kalash (hgdp)
@
1.44


2

97.7%
french (hgdp)
+
2.3%
brahui (hgdp)
@
1.47


3

97.7%
french (hgdp)
+
2.3%
balochi (hgdp)
@
1.48


4

96.8%
french (hgdp)
+
3.2%
tajik (yunusbayev)
@
1.48


5

97.7%
french (hgdp)
+
2.3%
makrani (hgdp)
@
1.49


6

97.5%
french (hgdp)
+
2.5%
bhatia (harappa)
@
1.51


7

97.4%
french (hgdp)
+
2.6%
pathan (hgdp)
@
1.52


8

97.5%
french (hgdp)
+
2.5%
burusho (hgdp)
@
1.53


9

97.3%
french (hgdp)
+
2.7%
pashtun (harappa)
@
1.54


10

97.2%
french (hgdp)
+
2.8%
urkarah (xing)
@
1.55


11

97.4%
french (hgdp)
+
2.6%
lezgin (behar)
@
1.57


12

97.6%
french (hgdp)
+
2.4%
sindhi (harappa)
@
1.58


13

97.1%
french (hgdp)
+
2.9%
stalskoe (xing)
@
1.58


14

97.3%
french (hgdp)
+
2.7%
haryana-jatt (harappa)
@
1.58


15

97.7%
french (hgdp)
+
2.3%
punjabi-arain (xing)
@
1.58


16

97.5%
french (hgdp)
+
2.5%
punjabi-jatt-sikh (harappa)
@
1.59


17

97.6%
french (hgdp)
+
2.4%
punjabi-khatri (harappa)
@
1.59


18

97.7%
french (hgdp)
+
2.3%
punjabi-jatt-muslim (harappa)
@
1.61


19

97.7%
french (hgdp)
+
2.3%
kashmiri (harappa)
@
1.61


20

97.8%
french (hgdp)
+
2.2%
kashmiri-pandit (reich)
@
1.62