Neanderthal Ydna

[FONT=Arial, sans-serif]Neatherhal/Denisova/Heildebergensis Y-Data Output from BAM Analysis Kit:[/FONT]


[FONT=Arial, sans-serif]DenisovaCave Child[/FONT]


[FONT=Arial, sans-serif]#Mutation ISOGG-Y-Haplogroup[/FONT]
[FONT=Arial, sans-serif]CTS3662/M5671/PF704= CT[/FONT]
[FONT=Arial, sans-serif]CTS3837= T[/FONT]
[FONT=Arial, sans-serif]CTS12478/PF6529= R1b1a2[/FONT]
[FONT=Arial, sans-serif]FGC5628/Y4010= R1b1a2a1a2c1f2a1a[/FONT]
[FONT=Arial, sans-serif]L2/S139= R1b1a2a1a2b1[/FONT]
[FONT=Arial, sans-serif]L16/M522/PF3493/S138= IJK[/FONT]
[FONT=Arial, sans-serif]L268= P/(Investigation)[/FONT]
[FONT=Arial, sans-serif]L467/KL2= O3a1[/FONT]
[FONT=Arial, sans-serif]L471/PF5989= P/(Investigation)[/FONT]
[FONT=Arial, sans-serif]L611= E/(Investigation)[/FONT]
[FONT=Arial, sans-serif]L721/PF6020= P/(Investigation)[/FONT]
[FONT=Arial, sans-serif]L1004= A1[/FONT]
[FONT=Arial, sans-serif]L1136= A0-T[/FONT]
[FONT=Arial, sans-serif]M251/M9122/PF699= BT[/FONT]
[FONT=Arial, sans-serif]M294= CT[/FONT]
[FONT=Arial, sans-serif]M522/L16/PF3493/S138= IJK[/FONT]
[FONT=Arial, sans-serif]M3581/PF3047= G2[/FONT]
[FONT=Arial, sans-serif]M5585/PF1414/V9= CT[/FONT]
[FONT=Arial, sans-serif]M5588/PF210= CT[/FONT]
[FONT=Arial, sans-serif]M5607= CT[/FONT]
[FONT=Arial, sans-serif]M5609= CT[/FONT]
[FONT=Arial, sans-serif]M5613= CT[/FONT]
[FONT=Arial, sans-serif]M5671/CTS3662/PF704= CT[/FONT]
[FONT=Arial, sans-serif]M5786/PF1061= CT[/FONT]
[FONT=Arial, sans-serif]M8967= BT[/FONT]
[FONT=Arial, sans-serif]M8977= BT[/FONT]
[FONT=Arial, sans-serif]M8994= BT[/FONT]
[FONT=Arial, sans-serif]M9046/PF324= BT[/FONT]
[FONT=Arial, sans-serif]M9083= BT[/FONT]
[FONT=Arial, sans-serif]M9094/PF671= BT[/FONT]
[FONT=Arial, sans-serif]M9097/PF672= BT[/FONT]
[FONT=Arial, sans-serif]M9122/M251/PF699= BT[/FONT]
[FONT=Arial, sans-serif]M9138= BT[/FONT]
[FONT=Arial, sans-serif]M9187= BT[/FONT]
[FONT=Arial, sans-serif]M9258= BT[/FONT]
[FONT=Arial, sans-serif]M9295/PF1000= BT[/FONT]
[FONT=Arial, sans-serif]M9310= BT[/FONT]
[FONT=Arial, sans-serif]M9331/PF1057= BT[/FONT]
[FONT=Arial, sans-serif]M9338/PF1064= BT[/FONT]
[FONT=Arial, sans-serif]M9378= BT[/FONT]
[FONT=Arial, sans-serif]P158/PF2706= F[/FONT]
[FONT=Arial, sans-serif]P225= R1[/FONT]
[FONT=Arial, sans-serif]P310/PF6546/S129= R1b1a2a1a[/FONT]
[FONT=Arial, sans-serif]PF79= BT[/FONT]
[FONT=Arial, sans-serif]PF210/M5588= CT[/FONT]
[FONT=Arial, sans-serif]PF324/M9046= BT[/FONT]
[FONT=Arial, sans-serif]PF626= BT[/FONT]
[FONT=Arial, sans-serif]PF672/M9097= BT[/FONT]
[FONT=Arial, sans-serif]PF699/M251/M9122= BT[/FONT]
[FONT=Arial, sans-serif]PF704/CTS3662/M5671= CT[/FONT]
[FONT=Arial, sans-serif]PF1000/M9295= BT[/FONT]
[FONT=Arial, sans-serif]PF1057/M9331= BT[/FONT]
[FONT=Arial, sans-serif]PF1061/M5786= CT[/FONT]
[FONT=Arial, sans-serif]PF1064/M9338= BT[/FONT]
[FONT=Arial, sans-serif]PF1414/M5585/V9= CT[/FONT]
[FONT=Arial, sans-serif]PF2706/P158= F[/FONT]
[FONT=Arial, sans-serif]PF3047/M3581= G2[/FONT]
[FONT=Arial, sans-serif]PF3493/L16/M522/S138= IJK[/FONT]
[FONT=Arial, sans-serif]PF5989/L471= P/(Investigation)[/FONT]
[FONT=Arial, sans-serif]PF6020/L721= P/(Investigation)[/FONT]
[FONT=Arial, sans-serif]PF6497/YSC0000219= R1b1a2[/FONT]
[FONT=Arial, sans-serif]PF6529/CTS12478= R1b1a2[/FONT]
[FONT=Arial, sans-serif]PF6546/P310/S129= R1b1a2a1a[/FONT]
[FONT=Arial, sans-serif]S129/P310/PF6546= R1b1a2a1a[/FONT]
[FONT=Arial, sans-serif]S138/L16/M522/PF3493= IJK[/FONT]
[FONT=Arial, sans-serif]S139/L2= R1b1a2a1a2b1[/FONT]
[FONT=Arial, sans-serif]V9/M5585/PF1414= CT[/FONT]
[FONT=Arial, sans-serif]V84= B/(Investigation)[/FONT]
[FONT=Arial, sans-serif]Y1480= CT[/FONT]
[FONT=Arial, sans-serif]Y1531= CT[/FONT]
[FONT=Arial, sans-serif]Y1791= CT[/FONT]
[FONT=Arial, sans-serif]Y4010/FGC5628= R1b1a2a1a2c1f2a1a[/FONT]
[FONT=Arial, sans-serif]YSC0000219/PF6497= R1b1a2[/FONT]
[FONT=Arial, sans-serif]Z1357/CTS7128= C1a1a2[/FONT]
[FONT=Arial, sans-serif]Z11933= BT[/FONT]
[FONT=Arial, sans-serif]Z11979= BT[/FONT]
[FONT=Arial, sans-serif]Z12110= BT[/FONT]
[FONT=Arial, sans-serif]Z13341= H3a[/FONT]
[FONT=Arial, sans-serif]Z15165= E1a2[/FONT]
[FONT=Arial, sans-serif]Z17357= BT[/FONT]
[FONT=Arial, sans-serif]Z17378= BT[/FONT]
[FONT=Arial, sans-serif]Z17385= BT[/FONT]
[FONT=Arial, sans-serif]Z17457= E1a1[/FONT]
[FONT=Arial, sans-serif]Z17710= CT[/FONT]


[FONT=Arial, sans-serif]Simade los Huesos (2 samples had Y-data)[/FONT]


[FONT=Arial, sans-serif]#Mutation ISOGG-Y-Haplogroup[/FONT]
[FONT=Arial, sans-serif]M9039= BT[/FONT]
[FONT=Arial, sans-serif]M9156/PF764= BT[/FONT]
[FONT=Arial, sans-serif]PF764/M9156= BT[/FONT]


[FONT=Arial, sans-serif]#Mutation ISOGG-Y-Haplogroup[/FONT]
[FONT=Arial, sans-serif]M9359= BT[/FONT]


[FONT=Arial, sans-serif]ForbesQuarry[/FONT]


[FONT=Arial, sans-serif]#Mutation ISOGG-Y-Haplogroup[/FONT]
[FONT=Arial, sans-serif]PF620= BT[/FONT]
[FONT=Arial, sans-serif]Z12005= BT[/FONT]
[FONT=Arial, sans-serif]Z14904= E1a2b1a1a1[/FONT]


[FONT=Arial, sans-serif]Mezmaiskaya[/FONT]


[FONT=Arial, sans-serif]#Mutation ISOGG-Y-Haplogroup[/FONT]
[FONT=Arial, sans-serif]50f2(P)= B2b1[/FONT]
[FONT=Arial, sans-serif]CTS484= T1a1[/FONT]
[FONT=Arial, sans-serif]CTS7482/M5720= CT[/FONT]
[FONT=Arial, sans-serif]CTS8591= R1b1a2[/FONT]
[FONT=Arial, sans-serif]CTS8608/M5745= CT[/FONT]
[FONT=Arial, sans-serif]CTS12019= E1b1b1a1a1[/FONT]
[FONT=Arial, sans-serif]CTS12440/M3629/PF3126= G[/FONT]
[FONT=Arial, sans-serif]FGC756= G2a1a1a1a1a1b1[/FONT]
[FONT=Arial, sans-serif]FGC1920/Y2754= Q1b1a1a1a1b[/FONT]
[FONT=Arial, sans-serif]L1129= A0-T[/FONT]
[FONT=Arial, sans-serif]M141= A1b1a1[/FONT]
[FONT=Arial, sans-serif]M734/PF6057/S4/YSC0000201= R[/FONT]
[FONT=Arial, sans-serif]M3629/CTS12440/PF3126= G[/FONT]
[FONT=Arial, sans-serif]M5630= CT[/FONT]
[FONT=Arial, sans-serif]M5720/CTS7482= CT[/FONT]
[FONT=Arial, sans-serif]M5738= CT[/FONT]
[FONT=Arial, sans-serif]M5745/CTS8608= CT[/FONT]
[FONT=Arial, sans-serif]M5786/PF1061= CT[/FONT]
[FONT=Arial, sans-serif]M5811/PF1238= CT[/FONT]
[FONT=Arial, sans-serif]M8980/PF229= BT[/FONT]
[FONT=Arial, sans-serif]M9005= BT[/FONT]
[FONT=Arial, sans-serif]M9086/PF648= BT[/FONT]
[FONT=Arial, sans-serif]M9192= BT[/FONT]
[FONT=Arial, sans-serif]M9227= BT[/FONT]
[FONT=Arial, sans-serif]M9254= BT[/FONT]
[FONT=Arial, sans-serif]M9266/PF946= BT[/FONT]
[FONT=Arial, sans-serif]PF229/M8980= BT[/FONT]
[FONT=Arial, sans-serif]PF648/M9086= BT[/FONT]
[FONT=Arial, sans-serif]PF946/M9266= BT[/FONT]
[FONT=Arial, sans-serif]PF1061/M5786= CT[/FONT]
[FONT=Arial, sans-serif]PF1238/M5811= CT[/FONT]
[FONT=Arial, sans-serif]PF3126/CTS12440/M3629= G[/FONT]
[FONT=Arial, sans-serif]PF6057/M734/S4/YSC0000201= R[/FONT]
[FONT=Arial, sans-serif]S4/M734/PF6057/YSC0000201= R[/FONT]
[FONT=Arial, sans-serif]S355/Z196= R1b1a2a1a2a1[/FONT]
[FONT=Arial, sans-serif]S484/Z48= R/(Investigation)[/FONT]
[FONT=Arial, sans-serif]Y1521= CT[/FONT]
[FONT=Arial, sans-serif]Y1580= CT[/FONT]
[FONT=Arial, sans-serif]Y2754/FGC1920= Q1b1a1a1a1b[/FONT]
[FONT=Arial, sans-serif]YSC0000201/M734/PF6057/S4= R[/FONT]
[FONT=Arial, sans-serif]Z47= R/(Investigation)[/FONT]
[FONT=Arial, sans-serif]Z48/S484= R/(Investigation)[/FONT]
[FONT=Arial, sans-serif]Z848= E1b1b1b2a1[/FONT]
[FONT=Arial, sans-serif]Z930/CTS3045= E1a[/FONT]
[FONT=Arial, sans-serif]Z1842= J1a3a[/FONT]
[FONT=Arial, sans-serif]Z6106= G[/FONT]
[FONT=Arial, sans-serif]Z6107= G[/FONT]
[FONT=Arial, sans-serif]Z12477= C1b1a1a[/FONT]
[FONT=Arial, sans-serif]Z13364= H3a[/FONT]
[FONT=Arial, sans-serif]Z13439= H3a[/FONT]
[FONT=Arial, sans-serif]Z13616= H3[/FONT]
[FONT=Arial, sans-serif]Z14907= E1a2b1a1a1[/FONT]
[FONT=Arial, sans-serif]Z14926= E1a2b1a1a1[/FONT]
[FONT=Arial, sans-serif]Z15557= E1a[/FONT]
[FONT=Arial, sans-serif]Z16208= E1b1a1a1c2c3c[/FONT]
[FONT=Arial, sans-serif]Z16986= I[/FONT]
[FONT=Arial, sans-serif]Z17342= BT[/FONT]
[FONT=Arial, sans-serif]Z17897= A1b[/FONT]
 
It is much more probably, in my opinion, the reason for incompatibility between humans and Neanderthals has to do with chromosomal differences rather than to Y chromosome itself. The genes may not have aligned the way lions and tigers do not even though the numbers are the same.
 
Neandertal had a bigger head than Sapiens , so it could lead to impossibility for women Sapiens to give birth to a Neandertal child . For a Neandertal woman no problem to have one or the other . This could partly explain the decrease of male Neandertal genes ?
 
Neandertal had a bigger head than Sapiens , so it could lead to impossibility for women Sapiens to give birth to a Neandertal child . For a Neandertal woman no problem to have one or the other . This could partly explain the decrease of male Neandertal genes ?

Modern Human infants have soft spots on top of their heads to facilitate the skull to change shape during birth, … I guess it would have been the same for Neanderthal newborns.
 
… Obviously the newborn was half Sapiens and half Neanderthal, and in addition to the skull soft spots, the head would have been smaller than a Neanderthal infant.
 
Jebel Irhoud + Qafzeh and Skhul DNA need be sequenced imo. Would give wonderful insight t the origins of Hss and their interaction with Near East Neanderthals
 
While the two groups did overlap for a long time in some areas, we have to consider the possibility that there were matings that not produced successful offspring who just don't happen to be ancestors. In that case the issue would not be inter-group incompatibility, but the failure of the sapiens group to re-enter the broader sapiens pool. If I remember correctly, the very first Europeans, who are the ones who interacted with Neanderthals for thousands of years, only left a tiny genetic imprint on the subsequent European populations.

How do we know that Neanderthal males and Sapiens females ever mated?
 

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