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Thread: 28 new German genomes on Gedmatch (neolithic to BA)

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    28 new German genomes on Gedmatch (neolithic to BA)

    I recently converted and uploaded those genomes from Germany (neolithic to Unetice).

    M273370 I0026, Germany, LBK2155, 5500-4800 BC
    M880753 I0025, Germany, LBK1992, 5500-4800 BC
    M599919 I0022, Germany, LBK1976, 5500-4800 BC
    M649684 I0056, Halberstadt-Sonntagsfeld, Germany; HAL14, 5206-5052 BC
    M836941 I0046, Halberstadt-Sonntagsfeld, Germany: HAL5, 5206-5004 BC
    M872809 I0048, Halberstadt-Sonntagsfeld, Germany: HAL25, 5206-5052 BC
    M543464 I0057, Halberstadt-Sonntagsfeld; HAL34, 5207-5067 BC
    M800469 I0795, Karsdorf, Germany; KAR6a, 5207-5070 BC
    M138990 I0659, Halberstadt-Sonntagsfeld, Germany; HAL2, 5079-4997 BC
    M671772 I0807, Esperstedt, Germany; ESP30, 3887-3797 BC
    M679282 I0559, Quedlinburg, Germany; QLB15D, 3645-3537 BC
    M336699 I0560, Quedlinburg, Germany; QLB18A, 3640-3510 BC
    M501953 I0550, Karsdorf, Germany; KAR22a, 2564-2475 BC
    M685793 I0108, Rothenschirmbach, Germany; ROT6, 2497-2436 BC
    M423167 I0106, Esperstedt, Germany; ESP26, 2454-2291 BC
    M759381 I0049, Esperstedt, Germany; ESP22, 2454-2291 cal BC
    M656492 IO111, Rothenschirmbach, Germany; ROT4, 2414-2333 BC
    M788904 I0058, enzingerode-Heimburg, Germany; BZH4, 2283-2146 BC
    M088525 I0059, Benzingerode-Heimburg, Germany; BZH6, 2286-2153 BC
    M346264 I0113, Quedlinburg XII, Germany; QUEXII4, 2290-2130 BC
    M604436 I0060, Rothenschirmbach, Germany; ROT3, 2294-2206 BC
    M801804 Benzingerode-Heimburg, Germany; BZH12, 2204-2136 BC
    M554833 I0117, Esperstedt, Germany; ESP29, 2199-2064 BC
    M580039 I0114, Esperstedt, Germany; ESP2, 2131-1979 BC
    M645059 I0804, Eulau, Germany; EUL57B, 2131-1982 BC
    M502450 I0803, Eulau, Germany; EUL41A, 2115-1966 BC
    M839314 I0047, Halberstadt-Sonntagsfeld, Germany; HAL16, 2022-1937 BC
    M198517 I0164, Quedlinburg VIII, Germany; QUEVII6, 2012-1919 BC
    M419880 I0115, Esperstedt, Germany; ESP3, 1931-1780 BC

  2. #2
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    Some comparison in K36 of above, also other GErman kits already uploaded (colored blue). Those colored pink are very low-coveraged.


    M273370 M880753 M880753 M649684 M836941 M872809 M543464 M800469 M138990 M512608 M572125

    I0026, Germany, LBK2155, 5500-4800 BC I0025, Germany, LBK1992, 5500-4800 BC I0022, Germany, LBK1976, 5500-4800 BC I0056, Halberstadt-Sonntagsfeld, Germany; HAL14, 5206-5052 BC I0046, Halberstadt-Sonntagsfeld, Germany: HAL5, 5206-5004 BC I0048, Halberstadt-Sonntagsfeld, Germany: HAL25, 5206-5052 BC I0057, Halberstadt-Sonntagsfeld; HAL34, 5207-5067 BC I0795, Karsdorf, Germany; KAR6a, 5207-5070 BC I0659, Halberstadt-Sonntagsfeld, Germany; HAL2, 5079-4997 BC (I0100 LBK) (I0054 LBK)
    Amerindian 0 0 0 0 0 0 0 0 0 0 0
    Arabian 3,53 1,56 1,56 3,28 0 0 0 0 0 1,73 0
    Armenian 0 0 0 0 0 0 2,77 3,5 0 0 0
    Basque 1,61 2,56 2,56 5,32 2,84 0 0 0 5,65 1,86 2,7
    Central_African 0 0 0 0 0 0 0 0 0 0 0
    Central_Euro 0 0 0 0 0 0 0 0 0 0 0
    East_African 0 0 0 0 0 0 0 0 0 0 0
    East_Asian 0 0 0 0 0 0 0 0 0 0 0
    East_Balkan 0 0,34 0,34 0 6,66 0 5,84 0,21 0 1,68 2,35
    East_Central_Asian 0 0 0 0 0 0 0 0 0 0 0
    East_Central_Euro 0 0 0 0 0 0 0 0 0 0 0
    East_Med 12,88 13,66 13,66 7,35 7,8 0 3,06 4,35 5,06 15,71 12,67
    Eastern_Euro 0 0 0 0 0 0 0 0 0 0 0
    Fennoscandian 0 0 0 0 0 0 0 0 0 0 0
    French 0 2,28 2,28 0 0 0 0 0 0 0 0
    Iberian 8,9 18,37 18,37 35,71 10,52 42,18 0 49,57 11,41 13,41 10,44
    Indo-Chinese 0 0 0 0 0 0 0 0 0 0 0
    Italian 46,07 31,2 31,2 19,07 36 37,7 40,5 18,64 40,43 36,09 44,26
    Malayan 0 0 0 0 0 0 0 0 0 0 0
    Near_Eastern 0 0 0 0 0 1,23 0 0 0 0 0
    North_African 0 0 0 0 0 0 0 6,83 0 0 0
    North_Atlantic 0 0 0 0 0 0 0 0 0 0 0
    North_Caucasian 0 0 0 0 0 0 0 0 0 0 0
    North_Sea 0 0 0 0 0 0 0 0 0 0 0
    Northeast_African 0 0 0 0 0 0 0 0 0 0 0
    Oceanian 0 0 0 0 0 0 0 0 0 0 0
    Omotic 0 0 0 0 0 0 0 0 0 0 0
    Pygmy 0 0 0 0 0 0 0 0,88 0 0 0
    Siberian 0 0 0 0 0 0 0 0 0 0 0
    South_Asian 0 0 0 0 0 0 0 0 0 0 0
    South_Central_Asian 0 0 0 0 0 0 0 0 0 0 0
    South_Chinese 0 0 0 0 0 0 0 0 0 0 0
    Volga-Ural 0 0 0 0 0 0 0 0 0 0 0
    West_African 0 0 0 0 0 0 0 0 0 0 0
    West_Caucasian 0 0 0 0 0 0 0 0 0 0 0
    West_Med 27 30,04 30,04 29,26 36,18 18,88 47,83 16,03 37,44 29,53 27,56

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    M671772 M679282 M336699 M226800
    I0807, Esperstedt, Germany; ESP30, 3887-3797 BC I0559, Quedlinburg, Germany; QLB15D, 3645-3537 BC I0560, Quedlinburg, Germany; QLB18A, 3640-3510 BC (I0172 EsperstedtMN)
    Amerindian 0 0 0 0
    Arabian 0 0 0 0
    Armenian 0 0 0 0
    Basque 0 0,1 13,07 8,65
    Central_African 0 0 0 0
    Central_Euro 0 2,73 0 0,12
    East_African 0 0 0 0
    East_Asian 0 0 0 0
    East_Balkan 4,18 0 0 0
    East_Central_Asian 0 0 0 0
    East_Central_Euro 0 0,38 0 0
    East_Med 0 0 0 0
    Eastern_Euro 0 0 0 0
    Fennoscandian 0 0 0 0
    French 0 7,22 0 4,31
    Iberian 34,67 37,59 16,9 27,38
    Indo-Chinese 0 0 0 0
    Italian 35,08 32,25 35,92 30,62
    Malayan 0 0 0 0
    Near_Eastern 0 0 0 0
    North_African 0 0 0 1,43
    North_Atlantic 5,36 0 10,14 0
    North_Caucasian 0 0 0 0
    North_Sea 0 0 0 0
    Northeast_African 0 0 0 0
    Oceanian 0 0 0 0
    Omotic 0 0 0 0
    Pygmy 0 0 0 0
    Siberian 0 0 0 0
    South_Asian 0 0 0 0
    South_Central_Asian 0 0 0 0
    South_Chinese 0 0 0 0
    Volga-Ural 0 0 0 0
    West_African 0 0 0 0
    West_Caucasian 0 0 0 0
    West_Med 20,71 19,74 23,98 27,48

    M501953 M685793 M423167 M759381 M656492 M224345
    I0550, Karsdorf, Germany; KAR22a, 2564-2475 BC I0108, Rothenschirmbach, Germany; ROT6, 2497-2436 BC I0106, Esperstedt, Germany; ESP26, 2454-2291 BC I0049, Esperstedt, Germany; ESP22, 2454-2291 cal BC IO111, Rothenschirmbach, Germany; ROT4, 2414-2333 BC (I0103 Corded Ware Germany)
    Amerindian 0 0 0 0 0 0,67
    Arabian 0 0 0 0 0 0
    Armenian 0 0 1,77 0 0 0
    Basque 0 8,23 0 0 1,16 0
    Central_African 0 0 0 0 0 0
    Central_Euro 1,86 0 0,22 0 2,01 7,97
    East_African 0 0 0 0 0 0
    East_Asian 0 0 0 0 0 0
    East_Balkan 0 0 0 3,38 2,21 0
    East_Central_Asian 0 0 0 0 0 0
    East_Central_Euro 0,06 12,71 18,17 18,63 17,34 6,74
    East_Med 0 0 0 0 0 0
    Eastern_Euro 4,02 0 6,34 4,57 0,06 12,18
    Fennoscandian 25,67 1,08 17,17 5,95 0 15,76
    French 3,82 16,79 0,05 10,11 7,85 5,45
    Iberian 0 5,16 0 0 22,49 0
    Indo-Chinese 0 0 0 0 0 0
    Italian 0 4,87 0 0 0,56 0
    Malayan 0 0 0 0 0 0
    Near_Eastern 0 0 0 0 0 0
    North_African 0 0 0 0 0 0
    North_Atlantic 13,78 21,73 33,64 22,73 20,56 16,63
    North_Caucasian 0 0 0 8,11 0 12,16
    North_Sea 50,79 21,11 22,62 26,51 25,75 17,23
    Northeast_African 0 0 0 0 0 0
    Oceanian 0 0 0 0 0 0
    Omotic 0 0 0 0 0 0
    Pygmy 0 0 0 0 0 0
    Siberian 0 0 0 0 0 0
    South_Asian 0 0 0 0 0 0
    South_Central_Asian 0 0 0 0 0 5,2
    South_Chinese 0 0 0 0 0 0
    Volga-Ural 0 0 0 0 0 0
    West_African 0 0 0 0 0 0
    West_Caucasian 0 0 0 0 0 0
    West_Med 0 8,33 0 0 0 0


    M788904 M088525 M346264 M604436 T253390 M324645 T644357 T185931
    I0058, Benzingerode-Heimburg, Germany; BZH4, 2283-2146 BC I0059, Benzingerode-Heimburg, Germany; BZH6, 2286-2153 BC I0113, Quedlinburg XII, Germany; QUEXII4, 2290-2130 BC I0060, Rothenschirmbach, Germany; ROT3, 2294-2206 BC I0806, Quedlinburg VII 2, Germany,2296-2206 BC (I0112 BellBeaker) RISE563 Bell Beaker, Osterhofen-Altenmarkt, Germany - RISE560 Bell Beaker - Ausburg, Germany
    Amerindian 0 0 0 0 0 0 0 0
    Arabian 0 0 0 2,67 0 0 0 0
    Armenian 0 0 0 0 0 0 0 0
    Basque 5,52 2,59 0 6,82 4,85 4,14 0 3,98
    Central_African 0 0 0 0 0 0 0 0
    Central_Euro 2,51 6,75 0 0 1,69 5,45 7,9 0
    East_African 0 0 0 0 0 0 0 0
    East_Asian 0 0 0 0 0 0 0 0
    East_Balkan 1,04 0 0,35 1,42 0 0 0 0
    East_Central_Asian 0 0 0 0 0 0 0 0
    East_Central_Euro 14,28 15,24 14,24 0 16,01 13,81 13,78 13,65
    East_Med 0 0 0 0 0 0 0 0
    Eastern_Euro 0 7,21 0 5,13 7,57 6,54 0 0
    Fennoscandian 19,27 8,27 0 39,58 0 4,42 10,08 0
    French 11,65 7,56 8,74 0 9,96 4,37 8,43 0
    Iberian 13,87 12,82 22,86 15,79 22,7 14,41 8,37 20,86
    Indo-Chinese 0 0 0 0 0 0 0 0
    Italian 0 0 0 0 0 1,88 0 0
    Malayan 0 0 0 0 0 0 0 0
    Near_Eastern 0 0 0 0,91 0 0 0 0
    North_African 0 0 0 0 0 0 0 0
    North_Atlantic 3,16 13,25 31,18 17,13 9,4 20,09 17,79 31,35
    North_Caucasian 0 0 0 0 6,59 0 0 0
    North_Sea 26,69 25,59 7,33 4,49 21,24 23,98 31,33 29,82
    Northeast_African 0 0 0 0 0 0 0 0
    Oceanian 0 0 0 0 0 0 0 0
    Omotic 0 0 0 0 0 0 0 0
    Pygmy 0 0 0 0 0 0 0 0,33
    Siberian 0 0 0 0 0 0 0 0
    South_Asian 0 0 0 0 0 0 0 0
    South_Central_Asian 0 0 0 0 0 0 0 0
    South_Chinese 0 0 0 0 0 0 0 0
    Volga-Ural 0 0 0,83 0 0 0 0 0
    West_African 0 0 0 0 0 0 2,31 0
    West_Caucasian 1,97 0 0 0 0 0 0 0
    West_Med 0 0,73 14,47 6,06 0 0,9 0 0

    ,
    M801804 M554833 M580039 M645059 M502450
    Benzingerode-Heimburg, Germany; BZH12, 2204-2136 BC I0117, Esperstedt, Germany; ESP29, 2199-2064 BC I0114, Esperstedt, Germany; ESP2, 2131-1979 BC I0804, Eulau, Germany; EUL57B, 2131-1982 BC I0803, Eulau, Germany; EUL41A, 2115-1966 BC
    Amerindian 0 0 0 0 0
    Arabian 0 0 0 0 0
    Armenian 0 0 3,03 0 0
    Basque 17,41 0,51 1,99 0 7,4
    Central_African 0 0 0 0 0
    Central_Euro 7,64 2,76 2,31 0,21 0
    East_African 0 0 0 0 0
    East_Asian 0 0 0 0 0
    East_Balkan 0 1,84 0 0 0,19
    East_Central_Asian 0 0 0 0 0
    East_Central_Euro 4,1 3,21 5,92 21,69 10,07
    East_Med 0 0 0 0 0
    Eastern_Euro 7,11 6,74 0,29 0 4,23
    Fennoscandian 0 12,1 11,92 0 10,56
    French 5,21 6,99 4,86 0,52 5,3
    Iberian 0 21,41 23,39 66,43 19,85
    Indo-Chinese 0 0 0 0 0
    Italian 0 11,67 0,13 0 4,95
    Malayan 0 0 0 0 0
    Near_Eastern 0 0 0 0 0
    North_African 0 0 0 0 0
    North_Atlantic 44,39 7,29 6,78 0 8,49
    North_Caucasian 0 0 0 0 0
    North_Sea 7,46 23,52 38,33 9,7 27,52
    Northeast_African 0 0 0 0 0
    Oceanian 0 0 0 0 0
    Omotic 0 0 0 0 0
    Pygmy 0 0 0 0 0
    Siberian 0 0 0 0 0
    South_Asian 0 0 0 0 0
    South_Central_Asian 0 0 0 0 0
    South_Chinese 0 0 0 0 0
    Volga-Ural 0 0 1,04 1,46 1,02
    West_African 0 0 0 0 0
    West_Caucasian 6,68 0 0 0 0
    West_Med 0 1,96 0 0 0,42

    M839314 M198517 M419880
    I0047, Halberstadt-Sonntagsfeld, Germany; HAL16, 2022-1937 BC I0164, Quedlinburg VIII, Germany; QUEVII6, 2012-1919 BC I0115, Esperstedt, Germany; ESP3, 1931-1780 BC
    Amerindian 0 0 0
    Arabian 0 0 0
    Armenian 0 0 0
    Basque 3,1 0 0
    Central_African 0 0 0
    Central_Euro 0 5,89 4,61
    East_African 0 0 0
    East_Asian 0 0 0
    East_Balkan 0,37 1,88 11,54
    East_Central_Asian 0 0 0
    East_Central_Euro 10,51 12,04 13,96
    East_Med 0 0 0
    Eastern_Euro 4,49 7,1 0
    Fennoscandian 8,94 11,97 17,73
    French 13,42 6,81 3,96
    Iberian 0 0,57 0
    Indo-Chinese 0 0 0
    Italian 13 0,72 0
    Malayan 0 0 0
    Near_Eastern 0 0 0
    North_African 0 0 0
    North_Atlantic 24,34 26,04 26,57
    North_Caucasian 0 5,62 0
    North_Sea 21,8 21,23 17,63
    Northeast_African 0 0 0
    Oceanian 0 0 0
    Omotic 0 0 0
    Pygmy 0 0 0
    Siberian 0 0 0
    South_Asian 0 0 0
    South_Central_Asian 0 0 0
    South_Chinese 0 0 0
    Volga-Ural 0 0,14 0
    West_African 0 0 0
    West_Caucasian 0 0 0
    West_Med 0 0 3,99
    ,

    ,
    ,

    ,,

    T722032 M313201

    RISE471 Middle Bronze Age Tumulus Culture, Untermeitingen, Germany (no date given but traditionally ~1610-1450 BC) (I0099 HalberstadtLNBA)
    Amerindian 0 0
    Arabian 0 0
    Armenian 0 0
    Basque 0 0,24
    Central_African 0 0
    Central_Euro 0 3,46
    East_African 0 0
    East_Asian 0 0
    East_Balkan 4,61 0,66
    East_Central_Asian 0 0
    East_Central_Euro 4,4 11,11
    East_Med 0 0
    Eastern_Euro 0 8,83
    Fennoscandian 0 3,57
    French 25,33 7,13
    Iberian 17,69 13,56
    Indo-Chinese 0 0
    Italian 7,68 6,89
    Malayan 0 0
    Near_Eastern 0 0
    North_African 0 0
    North_Atlantic 10,47 18,89
    North_Caucasian 0 0
    North_Sea 13,59 25,59
    Northeast_African 0 0
    Oceanian 0 0
    Omotic 0 0
    Pygmy 0 0
    Siberian 0 0
    South_Asian 0 0
    South_Central_Asian 0 0
    South_Chinese 0 0
    Volga-Ural 0 0
    West_African 0 0
    West_Caucasian 5,28 0
    West_Med 10,96 0
    ,

  4. #4
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    Quote Originally Posted by mlukas View Post
    I recently converted and uploaded those genomes from Germany (neolithic to Unetice).
    Hi - could you please convert/add to Gedmatch - sample I2371 from Lipson et al. 2017?

    It is the 75th sample in the dataset at Reich lab.


    Thank you!

  5. #5
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    Quote Originally Posted by Vissigoth View Post

    the 75th sample in the dataset at Reich lab.

    In the... Lipson et al. Nature 2017 dataset at Reich lab (cannot post yet links)...

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