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Thread: NEW! All Gedmatch calculators on Vahaduo ON-LINE

  1. #101
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    Quote Originally Posted by Duarte View Post
    PCA & Vahaduo



    can you link the correct site for this program that has been updated

  2. #102
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  3. #103
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    1 members found this post helpful.
    Quote Originally Posted by torzio View Post
    can you link the correct site for this program that has been updated
    These are the links:

    Eurogenes K15 Ancient:
    http://vahaduo.genetics.ovh/k15ancient-vahaduo.htm

    Vahaduo tools for Gedmatch calculators - Main Page:
    http://vahaduo.genetics.ovh/

  4. #104
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    Quote Originally Posted by Duarte View Post
    These are the links:

    Eurogenes K15 Ancient:
    http://vahaduo.genetics.ovh/k15ancient-vahaduo.htm

    Vahaduo tools for Gedmatch calculators - Main Page:
    http://vahaduo.genetics.ovh/
    thanks

    i found them

    used it in post #103

  5. #105
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    Quote Originally Posted by torzio View Post
    thanks

    i found them
    You're welcome :)

  6. #106
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    Quote Originally Posted by Duarte View Post
    You're welcome :)
    see post 103 for my new split

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    Have you an online link to the updated k13 and k15 spreadsheets?
    I mean in a excel, or google doc format.

  9. #109
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    1 members found this post helpful.


    Here is the K15 PCA with the regional Italian samples provided by mlukas.

    I plot almost exactly on top of the Puglia sample. (I'm the red diamond)
    Last edited by Jovialis; 24-12-19 at 23:12.
    There can be no covenants between men and lions

  10. #110
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    Quote Originally Posted by Jovialis View Post


    Here is the K15 PCA with the regional Italian samples provided by mlukas.

    I plot almost exactly on top of the Puglia sample. (I'm the red diamond)

    I sent you my spot recently.......you can place it

    BTW.....can I get this a bit bigger .........eyes are not as good after I became a double grandpa


    Don't bother , I did it

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    1 members found this post helpful.
    great calculators, thanks for the links.
    Here is what I got from my 23andme v5 analyzed by gedmatch and filtered by vanaduo:






    Last edited by domogled; 26-12-19 at 18:29.
    E-S19928/Z25461>E-FT79190>E-FT79653
    (me, Peurača from poreklo.rs, german FT79190 { FT79653+}, and PF#34 sample {Z25461* Ytree, FT79653+})
    E1b1b1a1b1a6a1f~ && T2f1a1

  12. #112
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    1 members found this post helpful.
    More to come, here is R2, one of the Central Italian Neolithic samples:

    N_Grotta_Continenza_R2,2.55,15.52,0.00,0.00,47.41, 0.00,29.94,4.58,0.00,0.00,0.00,0.00,0.00,0.00,0.00

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    1 members found this post helpful.
    Target Distance Evens French_Basque Orcadian Ossetian Sardinian Somali
    Carlos 4.17107394 0.2 44.6 25.8 7.4 18.4 3.6
    Average 4.17107394 0.2 44.6 25.8 7.4 18.4 3.6
    RESET SORTINGCOPY TABLE AS CSVCOPY TABLE AS TSV

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    2 members found this post helpful.
    Quote Originally Posted by Jovialis View Post
    More to come, here is R2, one of the Central Italian Neolithic samples:
    N_Grotta_Continenza_R2,2.55,15.52,0.00,0.00,47.41, 0.00,29.94,4.58,0.00,0.00,0.00,0.00,0.00,0.00,0.00
    thanks, :)

    Distance and Single / EU K15 Ancient / with only the Rs Iron-Age + R2 Neol. Cent. Italian:




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    1 members found this post helpful.
    EU K15 Ancient




  16. #116
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    2 members found this post helpful.
    Quote Originally Posted by Salento View Post
    EU K15 Ancient
    K13 Ancient added http://vahaduo.genetics.ovh/k13_ancient-vahaduo.htm

    More samples will be added soon.
    G25 Maps
    K36 Ancestral Report and Chromosomal Analysis

    https://www.lm-genetics.com


  17. #117
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    5 members found this post helpful.
    I added this too

    BTW I added this too:

    IA_Castel_di_Decima_R1016,36.74,7.19,33.37,1,20.51 ,0,0,0,0,1.18,0,0,0
    IA_Boville_Ernica_R1021,37.07,8.81,31.95,2.08,18.9 4,0.63,0,0,0,0,0.52,0,0
    IA_Ardea_R850,11.62,6.21,21.32,16.86,32.99,9.34,0, 0.69,0.66,0,0,0.31,0
    IA_Ardea_R851,35.01,14.12,33.47,1.26,16.14,0,0,0,0 ,0,0,0,0
    IA_Etruscan_Veio_Grotta_Gramiccia_R1015,35.88,8.02 ,33.68,0,19.97,1.72,0,0.11,0,0.62,0,0,0
    IA_Civitavecchia_R475,21.89,7.06,33.22,0,25.63,6.6 ,0,0,0,0,0,3.92,1.68
    IA_Civitavecchia_R474,36.98,12.08,25.22,5.32,16.98 ,1.62,0,0,0.78,0.44,0,0.44,0.14
    IA_Civitavecchia_R473,33.91,12.08,31.64,0.33,18.52 ,3.33,0,0,0.18,0,0,0,0
    IA_Prenestina_Selicata_R437,19.08,5.15,27.36,15.02 ,28.43,4.56,0,0.4,0,0,0,0,0
    IA_Prenestina_Colombella_R435,40.46,14.59,27.65,2. 59,12.1,1.38,0.24,0,0.29,0.64,0,0,0.07
    IA_Protovillanovan_Martinsicuro_R1,29.01,13.68,21. 75,9.75,19.74,3.46,0,0,1.24,0.94,0.43,0,0

  18. #118
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    2 members found this post helpful.
    Cool, thanks @mlukas!

    Mine Eu k13 ancient :)



    Sorry i uploaded the old combo: this is the updated one

    Last edited by Stuvanè; 28-12-19 at 20:10. Reason: updating the K13 ancient combo

  19. #119
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    1 members found this post helpful.
    very nice Lucas

    my new ones






    below.....other beyond 11.5

    Admix Results (sorted):

    # Population Percent
    1 North_Atlantic 29.84
    2 West_Med 22.93
    3 East_Med 17.25
    4 Baltic 17.03
    5 West_Asian 8.43
    6 Red_Sea 2.31
    7 South_Asian 0.93
    8 East_Asian 0.67
    9 Sub-Saharan 0.34
    10 Oceanian 0.26

    Single Population Sharing:

    # Population (source) Distance
    1 North_Italian 5.98
    2 Tuscan 9.42
    3 Romanian 10.1
    4 Bulgarian 11.17


  20. #120
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    W3a1

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    Cheesy macaroni
    Country: France



    Eurogenes K13 ancient.




    What/who's Halton?

    Here are his K13 results on Gedmatch:


    Population Percent
    1 North_Atlantic 33.81
    2 East_Med 18.54
    3 West_Med 16.47
    4 Baltic 14.73
    5 West_Asian 10.5
    6 Red_Sea 3.14
    7 Siberian 1.41
    8 Oceanian 0.77
    9 South_Asian 0.57
    10 Sub-Saharan 0.05

    Single Population Sharing:

    # Population (source) Distance
    1 North_Italian 9.64
    2 Tuscan 11.21
    3 Romanian 12.04
    4 French 12.08

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 61% Italian_Abruzzo + 39% Orcadian @ 1.66
    2 62.1% Southeast_English + 37.9% Cyprian @ 1.67
    3 60.5% Southwest_English + 39.5% Cyprian @ 1.8
    4 58.7% Italian_Abruzzo + 41.3% Southeast_English @ 1.83
    5 62.1% Italian_Abruzzo + 37.9% West_Scottish @ 1.94
    6 61% Italian_Abruzzo + 39% North_Dutch @ 1.94
    7 60.9% Italian_Abruzzo + 39.1% Danish @ 1.94
    8 59.8% Orcadian + 40.2% Cyprian @ 1.95
    9 64.6% West_German + 35.4% Sephardic_Jewish @ 2

  21. #121
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    Quote Originally Posted by torzio View Post
    very nice Lucas

    my new ones






    below.....other beyond 11.5

    Admix Results (sorted):

    # Population Percent
    1 North_Atlantic 29.84
    2 West_Med 22.93
    3 East_Med 17.25
    4 Baltic 17.03
    5 West_Asian 8.43
    6 Red_Sea 2.31
    7 South_Asian 0.93
    8 East_Asian 0.67
    9 Sub-Saharan 0.34
    10 Oceanian 0.26

    Single Population Sharing:

    # Population (source) Distance
    1 North_Italian 5.98
    2 Tuscan 9.42
    3 Romanian 10.1
    4 Bulgarian 11.17


    DA195

    Kit GN2826307

    Admix Results (sorted):

    # Population Percent
    1 North_Atlantic 30.13
    2 Baltic 23.19
    3 West_Med 19.07
    4 East_Med 16.6
    5 West_Asian 7.34
    6 Northeast_African 1.08
    7 Amerindian 1.01
    8 South_Asian 0.78
    9 Oceanian 0.23
    10 Red_Sea 0.22
    11 Sub-Saharan 0.21
    12 East_Asian 0.13

    Single Population Sharing:

    # Population (source) Distance
    1 Serbian 6.36
    2 Romanian 6.92
    3 Bulgarian 9.14
    4 Hungarian 11.21
    5 Austrian 12.01
    6 North_Italian 12.36
    7 Moldavian 12.64
    8 French 13.54
    9 West_German 13.86
    10 Croatian 13.92
    11 East_German 14.08


    more Sycthians on getmatch
















    DA191 Hungary Scythian - kit number HR6053540

    DA195 Hungary Scythian - kit number GN2826307

    DA197 Hungary Scythian - kit number UM3393611

    DA198 Hungary Scythian - kit number SK9891773


    paper here

    https://science.sciencemag.org/content/360/6396/eaar7711



    and part of Hep B into europe
    https://www.biorxiv.org/content/10.1101/829473v1.full

  22. #122
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    1 members found this post helpful.
    Quote Originally Posted by TardisBlue View Post
    Eurogenes K13 ancient.




    What/who's Halton?

    Here are his K13 results on Gedmatch:


    Population Percent
    1 North_Atlantic 33.81
    2 East_Med 18.54
    3 West_Med 16.47
    4 Baltic 14.73
    5 West_Asian 10.5
    6 Red_Sea 3.14
    7 Siberian 1.41
    8 Oceanian 0.77
    9 South_Asian 0.57
    10 Sub-Saharan 0.05

    Single Population Sharing:

    # Population (source) Distance
    1 North_Italian 9.64
    2 Tuscan 11.21
    3 Romanian 12.04
    4 French 12.08

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 61% Italian_Abruzzo + 39% Orcadian @ 1.66
    2 62.1% Southeast_English + 37.9% Cyprian @ 1.67
    3 60.5% Southwest_English + 39.5% Cyprian @ 1.8
    4 58.7% Italian_Abruzzo + 41.3% Southeast_English @ 1.83
    5 62.1% Italian_Abruzzo + 37.9% West_Scottish @ 1.94
    6 61% Italian_Abruzzo + 39% North_Dutch @ 1.94
    7 60.9% Italian_Abruzzo + 39.1% Danish @ 1.94
    8 59.8% Orcadian + 40.2% Cyprian @ 1.95
    9 64.6% West_German + 35.4% Sephardic_Jewish @ 2
    I'm not sure, maybe some Collegno sample. I removed it temporarily form spreadsheet unless I find the source for it.

  23. #123
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    Thanks Lukaz - Very coll :)
    My results - Vahaduo Eurogenes K13 ANCIENT




    I12649_low_quality = Medieval Taifa of Valencia (1200 AD) - I12649:



    col001_col001 = Medieval Iberian (580 AD) - CL23
    Sequencing ID Sample ID
    CL110 CL110
    CL49 CL49
    CL97 CL97
    SZ41 SZ41
    COL001.A0101 CL23
    COL006.A0101 CL38
    COL018.A0101 CL121

    Last edited by Duarte; 29-12-19 at 01:23.

  24. #124
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    Quote Originally Posted by mlukas View Post
    I'm not sure, maybe some Collegno sample. I removed it temporarily form spreadsheet unless I find the source for it.

    Hi Lucas

    There are a few doubles in mine ...see post #119

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    Target: Carlos
    Distance: 0.1746% / 0.17462694
    5.8 I3807_morisco

    5.4 ATP2_iberia

    5.0 I2405_Neolithic_Paluki_GAC_culture_I2a_I2a

    4.8 SpaintheChalcolithic_I1300_Spain

    4.6 I0840_beaker_iberia

    4.2 I4252_Malopolska_Bell_Beaker_R1b_R1b

    3.0 I3757_Celtiberian_I3757_Celtiberian_U

    2.8 I0408_SpainMN

    2.8 I2478_Beaker_North_Italy_I2478

    2.8 RISE42_Marbjerg_Denmark_3681_years_M_CT_CTS2711_H2 c1

    2.6 RISE21_Karlstrup_Denmark_3092_years_N1a1a2

    2.4 BeakerNorthItaly_I2478

    2.4 grt035_Sigtuna_10-12_century

    2.4 RISE94_Viby_Sweden_4025_years_M_K_M1221_K1a2a

    2.0 I2433_Neolithic_Paluki_GAC_culture

    2.0 I5358_Neolithic_Wales_5kya

    2.0 RISE150_Przeclawice_Poland_3469_years_U5a1b1

    2.0 Sope_r_Jabara_Estonia_Corded_Ware_culture_4575_435 0_F_H5a1

    1.8 I1388_Beaker_South_France_I1388

    1.8 I2403_Neolithic_Paluki_GAC_culture_I2a_I2a

    1.8 Mota1_Africa

    1.8 RISE71_2196_2023_BC_Denmark_203_604

    1.6 i2051_Dolmen_1410_1210_BC_M_J2a_H6a1a2a

    1.4 KEB_4_(Morocco._5000_BP_keb.4_Morocco_3780-3650y.old

    1.4 Polish_Bell_Beaker_I4253_Samborzec._Poland_2571022 08_BC

    1.4 RISE436_Tiefbrunn_Germany_4124_years_M_CT_CTS3662_ N

    1.4 V2_Vratitsa_Bulgaria_1500_1100_BC_M_U2e1_2_3

    1.2 DA199_Late_Medieval_Hungary

    1.2 HGDP00945_Yakut_Male_HGDP00945

    1.2 I0459_23andMeV3_beaker_iberia

    1.2 Natufian_merged_M041601

    1.2 RISE371_Szoreg_-_C_(Sziv_Utca)._Hungary_F_U5a2b_3653_years

    1.0 I2434_Neolithic_Paluki_GAC_culture

    1.0 Satsurblia_CHG

    1.0 Sven(566)_Sven(566)_M

    0.8 Andronovo_RISE503_Russia_174601298_BC

    0.8 i6268_Klady_Maykop_culture_5564_M_R1a_j2a1

    0.6 EsperstedtMN_I0172_Germany

    0.6 I0867_LevantN

    0.6 i1722_Unakozovskaya_Eneolithic_Caucasus_6403_F_R1a

    0.6 I2650_Neolithic_Orkney_5kya

    0.6 I2932_Neolithic_Orkney_4kya

    0.6 I2977_Neolithic_Orkney_5kya

    0.6 I5359_Neolithic_Wales_6kya

    0.6 I8212_NE_Iberia_Greek_(Empuries1)_500_350_BCE_R

    0.6 kzb005_srubno_alakulskaya_1881_1692bce

    0.6 RISE207_Angamollan_Sweden_3130_years_CT_CTS4650_J1

    0.6 RISE371_Szoreg_C_(Sziv_Utca)_Hungary

    0.4 Ballynahatty_Ireland_3343_3020_BCE

    0.4 I12647_iberia

    0.4 I1392_Beaker_No_Steppe_France_4kya

    0.4 I7424_morisco

    0.4 kzb003_srubno_alakulskaya_1773_1627BCE_M_R1a_R_Z94 _H

    0.4 MK5009_Marinskaya_5_N_Caucasus_4710_R1b1a2_R1a1a

    0.4 RISE145_Wielkopolska_Unetice

    0.4 RISE507_8_River_Kuyum_Russia_4423_years_U5a1a1

    0.4 RISE97_Fredriksberg_Sweden_3590_years_CT_Y1580_K2a 5

    0.4 scy303_scythian_Moldova_380_203bce

    0.4 Unetice_I0047

    0.2 caananite_ERS1790733_caananite_ERS1790733

    0.2 copt315_copt315

    0.2 DA92_M_R1b_M73

    0.2 I0099_HalberstadtLNBA

    0.2 I0164_Unetice

    0.2 I0406_SpainMN

    0.2 I1495_NE7_HungaryEN

    0.2 I1497_CO1_Hungary_MN

    0.2 I1658_ArmeniaEBA

    0.2 I3808_iberia

    0.2 I8203_iberia

    0.2 ILK002_Neolithic_Podolia_GAC_I2a_I2a

    0.2 kzb001_kzb001_srubno-alakulskaya_F_U4b1a1a1_1742-1546BCE

    0.2 kzb006_srubno_alakulskaya_1771_1626bce

    0.2 LevantBA_M291439

    0.2 LevantPPNB_I0867_Israel_730006750

    0.2 N27_Neolithic_Kujawy_Lengyel_BKG

    0.2 NE2_Debrecen_Tocopart_Erd?alja_Hungary_5060_5290_c al_BC_F_HV

    0.2 RISE00_Corded_Estonia_RISE00_Corded_Estonia

    0.2 RISE254_Szazhalombatta_Foldvar_Hungary_3631_years_ GHIJK_Z12203_J1c9

    0.2 scy301_scythian_Moldova_390_205bce

    0.2 Sima_del_Angel._LU339_Spain_4889_BC

    0.2 SZ31_Longobard_M_T1a1a_PF5620_U4c2a_6-th_century

    0.2 sz31_szo029_Longobard_F_H74

    0.2 UneticeBellBeaker_RISE577_Poland_250001900_BC


    Distance to: Carlos
    7.21492897 I6581_Silesia_Bell_Beaker_R1b_R1b
    8.35882767 I8203_iberia
    8.46297229 IA_Prenestina_Colombella_R435
    9.66127838 I8474_iberia
    9.90558428 I3757_Celtiberian_I3757_Celtiberian_U
    9.95797168 I3759_Celtiberian_I3759_Celtiberian_m
    9.96173178 I12649_low_quality
    10.74408209 I6582_Silesia_Bell_Beaker
    10.91349165 I3758_Celtiberian_U
    11.16941359 RISE483_Erd_4_Hungary_CT_M5751_H2a1
    11.99042952 IA_Civitavecchia_R474
    12.97778101 I12516_iberia
    13.24262814 RISE254_Szazhalombatta_Foldvar_Hungary_3631_years_ GHIJK_Z12203_J1c9
    13.96597293 IA_Ardea_R851
    14.08940027 IA_Boville_Ernica_R1021
    14.15831558 col001_col001
    14.30416722 RISE564_Osterhofen_Altenmark_Germany_M_R_L51_HV
    14.32281746 DA199_Late_Medieval_Hungary
    14.89184676 I7498_Muslim_Iberian_1000_1100_CE_E1b1b1a1b1a_H3a1 _2
    15.01317421 BeakerNorthItaly_I2478
    15.01317421 I2478_Beaker_North_Italy_I2478
    15.25794547 IA_Civitavecchia_R473
    15.31191040 I7498_Muslim_Iberian_1000_1100_CE_E1b1b1a1b1a_H3a1
    15.87195640 I12644_Muslim_Iberian_1100_1300_CE2
    16.17077611 ILK002_Neolithic_Podolia_GAC_I2a_I2a


    There could be a calculator for Europe with all the old samples the E1b found in burials in Europe, it would be useful for those of us who are European and with haplogroup E because to date all the burden of E is focused on the Moorish of Iberia but many have haplogroup by dna And that does not coincide with this route and we want to know and it would be good a calculator with all the samples found in Europe and even in the nearby steps

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