Ancient DNA, admx. history and endogamy in the prehistoricAegean Skourtaniotietal2022

Hawk · Dec 25, 2022

Riverman said:
He is low coverage, but it is a derived E-L618 according to the experts on Anthrogenica. So the low coverage doesn't mean its E-V13, but upstream of it. If correct this suggests it is a side branch which survived further South, probably from the initial phase of the E-L618 spread in the Mediterranean, which led to the expansion within Impresso-Cardial and later Lengyel, Michelsberg, possibly also in Tripolye-Cucuteni. I guess it is either what remained from the earliest journey into Europe, or came back South from whereever the centre of E1b1b was in the Carpatho-Danubian sphere.

Cucuteni-Trypillia is absolutely out of question. Especially considering recent aDNA.

Riverman · Dec 25, 2022

Hawk said:
Cucuteni-Trypillia is absolutely out of question. Especially considering recent aDNA.

TCC had different provinces. We know for sure E1b1b wasn't dominant/that important there, but it could have been a minority and be it through contacts with Lengyel/Carpathian Basin groups.

Salento · Dec 25, 2022

Jovialis said:
Excellent the samples are avaliable, it must really be Christmas!

Merry Christmas everyone

... thanks to: Jovialis for the info, KingJohn for the link, and Teepean for the set

Dodecad K12b:

Code:

AID001_77.84%cov,4.84,0,2.17,1.31,33.24,10,0,0.20,10.47,0,34.97,2.79
AID002_74.78%cov,3.19,0,1.02,1.80,30.42,9.66,0,0,12.56,0.69,37.66,2.98
AID007_78.09%cov,3.33,0.51,1.33,0.06,34.49,11.32,0,0.04,11.07,0,35.10,2.76
AID008_79.55%cov,2.79,0.36,2.06,0.49,35.18,9.77,0,0,11.68,0.89,33.80,2.98
AID009_13.93%cov,0.71,0,0.72,0.05,30.95,15.51,0.85,0,7.56,0,39.98,3.68
AID010_6.95%cov,2.86,0.84,5.54,1.29,38.03,7.51,0,0.85,12.04,0,30.39,0.64
AID012_3.11%cov,0.01,0,2.45,0,21.39,19.42,5.88,1.19,6.10,0,38.54,5.01
AID014_15.45%cov,2.50,0,1.05,1.54,36.77,7.50,0,0,10.66,1.52,35.17,3.29
AID017_25.08%cov,5.93,0,1.71,2.47,29.23,17.25,2.44,0,7.75,0,28.98,4.23
APO004_31.39%cov,0,1.16,3.75,0,45.72,0,0.75,0,12.77,0.18,31.60,4.06
APO022_21.68%cov,0,0,5.42,0,32.52,4.39,0,1.23,11.88,0.48,42.53,1.55
APO023_30.30%cov,3.24,0,2.43,2.38,35.61,0,0.48,2.12,8.17,0,43.73,1.85
APO025_33.73%cov,1.18,0,3.76,1.84,37.02,0,0,0,9.98,0,42.85,3.38
APO028_5.62%cov,0,2.86,1.55,0,45.60,0,0,0,10.71,0,35.32,3.97
APO029_21.43%cov,0,0,3.12,0,47.63,0,0,3.81,14.74,1.06,29.12,0.52
APO037_16.02%cov,0,1.62,0,0.06,43.69,0,0,0.74,15.51,0,35.01,3.36
APO038_2.62%cov,4.67,0,6.52,0.36,32.49,11.00,0,2.14,10.04,0,32.78,0
APO043_17.92%cov,0,0.86,1.47,0,46.42,0,0,0,13.61,0,32.62,5.02
APO044_15.56%cov,0,0,0,0,45.35,0,0,0,13.80,0.77,37.03,3.04
GLI002_5.21%cov,0,0,2.94,0,42.35,4.04,3.00,1.19,12.87,0,33.61,0
GLI003_78.73%cov,3.25,0,1.12,0.33,34.47,9.76,0,0,12.01,0,38.59,0.47
HGC001_84.38%cov,0,0,4.12,0,35.73,0,0,0,13.97,0.22,45.48,0.49
HGC002_14.95%cov,0,0,1.40,0,34.86,0,0,2.71,12.27,0,48.75,0
HGC003_43.90%cov,0,0,1.58,0.05,36.41,0.32,0,0,12.47,0.61,48.23,0.32
HGC005_32.94%cov,0.05,0,2.78,0.30,39.91,0,0,0.65,14.02,0,41.60,0.69
HGC006-035_85.36%cov,1.61,0,2.27,0.25,38.09,0,0,0,14.12,0,43.50,0.16
HGC008_63.43%cov,0,0,3.76,0,37.70,0,0,0,14.31,0.31,42.66,1.26
HGC009_66.43%cov,0.48,0.13,2.82,0.18,36.43,0.73,0,0.41,15.25,0.40,42.81,0.38
HGC010-039_53.08%cov,0,0.35,4.55,0.97,36.67,0,0,0,12.49,0,42.15,2.82
HGC013_55.54%cov,0,0.25,1.67,0,40.51,0,0,0,13.69,0.40,42.73,0.75
HGC015_29.76%cov,0,0,3.83,0,36.15,0.56,0,0.24,12.95,0,46.28,0
HGC017-023-029_77.28%cov,0,0,4.67,0,35.30,0.12,0,0,16.44,0.39,42.59,0.49
HGC018_57.66%cov,0,0,2.00,0,37.82,0,0,0,13.16,0.46,45.54,1.02
HGC018-061_31.34%cov,0.31,0,1.91,0,37.09,0,0,0,12.46,1.77,42.58,3.88
HGC020-049-067_52.68%cov,0,0,3.35,0.58,36.82,0,0.23,0,13.32,0.62,42.33,2.75
HGC025_51.32%cov,0,0,3.43,0,40.37,0.34,0,0,13.89,0,40.06,1.91
HGC026-040_17.41%cov,0,0,5.44,0,38.76,0,0,0,16.57,0,38.74,0.49
HGC031_25.96%cov,1.70,0,0,2.19,34.19,3.61,0,0.08,14.24,1.45,40.10,2.43
HGC033_66.01%cov,0,0,5.44,0.20,36.15,0,0,0,15.59,0.06,42.28,0.28
HGC037_19.39%cov,1.85,1.45,3.09,0.90,36.97,0.75,0,0,12.17,0.14,39.08,3.59
HGC040_34.70%cov,0.91,0,5.50,0.77,36.64,0,0,0.43,13.70,1.71,39.09,1.24
HGC041-052_13.98%cov,0,0.06,3.85,1.47,43.47,0,0,1.46,8.90,0.57,37.97,2.26
HGC045-051_7.02%cov,7.84,0.22,0,0,41.68,0,0,0,12.04,0,35.91,2.31
HGC053-057_12.59%cov,4.43,1.12,6.13,0,33.09,0,0,0,12.24,0,42.29,0.70
HGC055-065_48.19%cov,1.93,0.92,4.92,0,34.70,1.91,0,0,12.86,1.00,39.44,2.33
HGC063_22.17%cov,0,0,1.33,0.82,34.30,0.16,0,0,14.27,0,47.01,2.11
KRO008_20.11%cov,0.88,2.18,3.48,0,32.02,13.26,1.91,0,9.02,0.35,34.08,2.83
KRO009_52.77%cov,2.85,1.23,1.12,0,35.76,16.91,0.49,0,8.91,0.24,29.13,3.37
KUK001_68.71%cov,4.39,1.55,3.96,0,33.85,7.36,0,0,11.40,0.58,34.74,2.16
KUK002_44.46%cov,1.31,0,3.85,1.51,35.44,2.28,0,0,10.76,0.22,42.22,2.42
KUK005_90.15%cov,1.48,0.50,1.66,0,32.07,10.73,0,0.72,12.70,0,39.36,0.79
KUK006_86.95%cov,2.25,0,2.70,0.60,35.63,9.48,0,0.69,11.69,0,35.44,1.51
LAZ017_39.10%cov,0,0,3.44,0.59,37.61,0,0,0.60,13.61,0,44.15,0
LAZ018_46.20%cov,2.65,0,1.94,0,31.38,5.91,0.04,0.70,11.88,0.42,45.09,0
LAZ019_20.16%cov,7.02,0,0,0,37.01,4.58,0,0,14.01,0,37.19,0.20
LAZ020_84.37%cov,4.27,0.24,1.08,0,35.70,2.45,0,0,14.93,0,41.22,0.12
LAZ021_15.72%cov,1.94,0,1.63,0,36.64,8.43,0,0,15.78,0,34.08,1.50
MYG001_51.65%cov,3.05,0,3.34,1.95,38.88,14.21,0,0,8.35,0,29.75,0.47
MYG002_38.92%cov,2.32,0,1.81,0,35.42,19.02,0,1.12,7.09,0,30.16,3.07
MYG003_78.18%cov,3.51,0,3.41,0,32.87,14.39,0,0.03,9.86,0,35.92,0
MYG004_79.26%cov,1.13,0,1.63,0,41.14,11.71,0,0,11.41,0,32.60,0.39
MYG005_61.51%cov,6.22,0,2.73,0,36.22,15.35,0,0.61,8.94,0,29.47,0.47
MYG006_76.25%cov,1.17,0,1.71,0,36.50,17.95,0.42,0,9.88,0,32.37,0
MYG008_72.34%cov,4.06,0,3.44,0,34.97,16.16,0,0,9.52,0,31.19,0.66
NST001_45.94%cov,0.22,0,2.22,0,40.78,4.24,0,0,12.21,2.41,34.20,3.72
NST004_11.60%cov,5.44,0.36,0,0,30.52,0,0.37,0.89,18.70,1.54,40.60,1.58
NST005_18.07%cov,0,0,2.55,0,44.88,1.21,0,0,13.13,0.71,34.38,3.14
NST010_15.61%cov,2.15,0,4.33,1.34,28.30,5.52,0,0,14.01,0,41.12,3.23
NST012_16.71%cov,7.34,0.50,1.31,0,29.40,0,0,0,8.50,3.37,47.45,2.11
TIR002_64.56%cov,1.49,0.80,3.38,1.03,34.30,8.78,0.12,0.61,11.19,0,38.31,0
XAN003_23.68%cov,0,0,2.54,0.20,37.92,7.57,0,0,12.14,0.63,38.19,0.80
XAN007_4.59%cov,0,0,2.54,1.10,30.41,9.73,0,0,23.02,0,32.41,0.78
XAN013_49.06%cov,1.46,0.91,3.58,0.40,33.93,0,0,0.27,14.44,0.48,42.41,2.12
XAN014_44.35%cov,0,0.01,5.11,0,34.43,2.04,0,0,14.25,2.17,40,1.99
XAN015_36.17%cov,0,0,3.42,0.01,35.55,0,0,0,14.14,1.40,42.93,2.54
XAN016_26.14%cov,1.32,0,3.61,0,30.14,9.33,1.29,0,9.61,0.09,41.54,3.06
XAN017_49.73%cov,0.09,0,1.92,0.90,32.89,9.56,0.10,0.13,10.62,0.38,40.27,3.15
XAN018_23.66%cov,1.89,0.47,0.65,0,33.12,3.49,0,0,11.91,1.22,42.24,5.02
XAN021_59.97%cov,0.92,0,1.96,0,36.60,7.41,0,0.02,11.91,2.43,35.86,2.89
XAN022_36.13%cov,6.52,0,0,0.17,26.05,1.98,0,0,14.42,2.24,44.72,3.90
XAN023_56.78%cov,4.82,1.17,2.84,0,38.76,8.60,0.24,0,9.82,0.14,30.92,2.70
XAN024_57.30%cov,3.65,0,2.71,0.12,23.98,7.45,0,1.25,12.68,0.96,45.03,2.17
XAN025_69.71%cov,3.24,0,3.26,0,32.21,5.74,0,0.08,12.72,1.79,38.70,2.26
XAN026_27.23%cov,7.50,0,3.84,1.60,25.75,8.55,0.34,0.30,10.87,0,37.72,3.53
XAN027_37.22%cov,2.73,2.32,4.89,0,30.83,7.94,0,0,12.27,1.23,35.01,2.78
XAN028_31.68%cov,0,0,0.81,0,39.40,0,0,1.40,12.30,1.79,42.22,2.08
XAN029_62.32%cov,0,0.12,3.67,0.85,36.54,0,0,0,15.19,1.07,39.77,2.78
XAN030_56.96%cov,5.39,0,0.94,0.08,34.02,20.20,0,0,9.54,0.81,24.87,4.14
XAN031_50.05%cov,3.62,1.10,3.90,0,35.36,6.87,0,0,7.03,0,39.35,2.77
XAN034_65.40%cov,0.06,0,4.78,1.22,33.97,3.09,0,0.54,12.87,0,41.51,1.96
XAN035_24.83%cov,0,0,0,0,39.15,5.18,0,0,12.71,0.81,38.07,4.08
XAN036_60.84%cov,0,0,3.70,0,36.39,7.39,0,0.11,11.84,0.52,36.46,3.60
XAN040_13.20%cov,2.54,0,9.08,0,35.75,11.77,0,0,11.99,1.33,25.21,2.34
XAN041_81.21%cov,0,0.51,2.36,0,34.69,2.22,0,0.66,14.26,1.14,42.29,1.86
XAN042_7.54%cov,2.63,0,0.94,0,32.87,15.15,0,5.58,9.83,0,33.00,0
XAN051_33.58%cov,3.71,1.42,4.26,0,33.12,18.38,0,0,7.70,2.31,26.99,2.10
XAN053_61.09%cov,1.25,0,0.37,1.30,38.25,4.79,0,0,14.93,0,35.70,3.41

Jovialis · Dec 25, 2022

Salento, you're the man! Merry Christmas!

Salento · Dec 25, 2022

Jovialis said:
Salento, you're the man! Merry Christmas!

Thanks Jovialis,… just in case reload the page, I posted twice because it didn’t save it correctly the first time … spacing / characters limitations.

Jovialis · Dec 26, 2022

Me vs all of the Ancient Greeks we have on record:

Distance to:	Jovialis
7.14385750	AID017_25.08%cov
7.29546434	MYG008_72.34%cov
7.83986607	MYG003_78.18%cov
8.04001866	MYG005_61.51%cov
8.85153659	XAN051_33.58%cov
8.91564916	APO038_2.62%cov
9.28975242	GRC_Palace_of_Nestor_EIA:I19368
9.36025641	XAN042_7.54%cov
9.93209444	KRO009_52.77%cov
9.98820805	Helladic_Logkas_MBA:Log02:Clemente_2021
10.03505356	MYG002_38.92%cov
10.07923112	KRO008_20.11%cov
10.12755153	AID001_77.84%cov
10.33672095	MYG006_76.25%cov
10.55572357	XAN030_56.96%cov
10.58047730	AID007_78.09%cov
10.88746986	GRC_Mycenaean_Kastrouli_BA:I13577
11.86185483	XAN026_27.23%cov
11.86311511	Himera_Civilian_Pop_Med:I20168
11.87413997	AID008_79.55%cov
11.88790982	MYG001_51.65%cov
11.96516193	G37_Sarakenos_Aegean_2335-2300_calBCE
12.02153068	AID002_74.78%cov
12.13122418	GRC_Mycenaean_Palace_of_Nestor_BA:I13518
12.32108761	Himera_Civilian_Pop_Med:I20166

Jovialis · Dec 26, 2022

Credit to Salento for processing the new 103 Ancient Greek samples in Dodecad K12b.

Here are all of the Ancient Greek samples on record, along with Yamnaya Samara and Italian and Greek HO samples projected on a PCA, with modern West Eurasian samples hidden as a source.

Omino · Dec 26, 2022

Mine vs the samples above

Distance to:	Omino
8.52729734	AID017_25.08%cov
9.31757479	XAN030_56.96%cov
9.34291175	XAN051_33.58%cov
9.46688967	MYG002_38.92%cov
9.79329873	MYG008_72.34%cov
10.37589032	MYG006_76.25%cov
10.45213854	KRO009_52.77%cov
10.97436103	MYG005_61.51%cov
11.13773316	XAN042_7.54%cov
11.38986391	MYG003_78.18%cov
12.87926240	KRO008_20.11%cov
13.72279855	AID009_13.93%cov
14.09677623	MYG001_51.65%cov
14.21383129	AID007_78.09%cov
14.31132768	APO038_2.62%cov
14.79415425	AID001_77.84%cov
15.56918110	AID012_3.11%cov
15.73789376	AID008_79.55%cov
15.93640800	AID002_74.78%cov
16.23339767	KUK005_90.15%cov
16.53749679	KUK006_86.95%cov
16.68605705	GLI003_78.73%cov
17.27504269	XAN027_37.22%cov
17.28524515	XAN026_27.23%cov
17.37075128	XAN040_13.20%cov

kingjohn · Dec 26, 2022

unlucky
riverman
i gave theytree site teepean anthrogenica user files
KUK002- is not even e1b1b1 he is r1b

https://www.theytree.com/sample/4f866836814e5ff358614a246c1c79af.html
https://www.theytree.com/tree/R-PF7558

and he can't find GLI002 bam the so called e1b1b1-z830 in snpisa tool
(which i realy realy doubt it
today in modern greeks there is 2-3% e-m34 mainly on e-m34>z841 branch
but some also on e-m84>pf6751
but i believe most of it came to greece in roman time )

p.s
at least i was correct in my prediction that there will be some r1b
individuals
which is only logic after the mycenaean paper

thanks salento for amazing work

and here is my k12b values closest from this paper
XAN026

distance:

Distance to:	adam
9.19156135	XAN026_27.23%cov
11.35398608	APO038_2.62%cov
11.49849121	MYG003_78.18%cov
11.59240700	AID017_25.08%cov
12.12334937	AID002_74.78%cov
12.37198448	XAN027_37.22%cov
12.43398166	AID001_77.84%cov
13.09171876	KRO008_20.11%cov
13.15755296	MYG008_72.34%cov
13.25611557	XAN042_7.54%cov
13.55016974	AID007_78.09%cov
13.61365124	KUK005_90.15%cov
13.76322273	KUK001_68.71%cov
14.17275203	MYG005_61.51%cov
14.54385781	GLI003_78.73%cov
14.57554116	AID008_79.55%cov
14.60529014	XAN051_33.58%cov
14.84802007	XAN016_26.14%cov
14.96713733	XAN025_69.71%cov
14.97880836	AID009_13.93%cov
15.02718869	NST010_15.61%cov
15.03624953	XAN024_57.30%cov
15.06592513	KUK006_86.95%cov
15.28356961	TIR002_64.56%cov
15.73249821	KRO009_52.77%cov

mount123 · Dec 26, 2022

Thanks to user Trojet for analyzing the Mygdalia bam files we now know that they are Z615(xZ597). These are new aDNA additions to already present and older Z615(xZ597) sample ID MOK15 2100-1800 BCE from EBA Mokrin Necropolis Vojvodina, Northern Serbia.

ID MYG001	MBA/LBA Mygdalia, Achaia, Greece	1600-1450 BCE (~1525 BCE)	J2b-L283>Z615(xZ597)	https://www.ebi.ac.uk/ena/browser/view/PRJEB56216
ID MYG008	MBA/LBA Mygdalia, Achaia, Greece	1600-1450 BCE (~1525 BCE)	J2b-L283>Z615(xZ597)	https://www.ebi.ac.uk/ena/browser/view/PRJEB56216
ID MYG006	MBA/LBA Mygdalia, Achaia, Greece	1600-1450 BCE (~1525 BCE)	J2b-L283>Z615(xZ597)	https://www.ebi.ac.uk/ena/browser/view/PRJEB56216
ID MYG005	MBA/LBA Mygdalia, Achaia, Greece	1600-1450 BCE (~1525 BCE)	J2b-L283>Z615(xZ597)	https://www.ebi.ac.uk/ena/browser/view/PRJEB56216

torzio · Dec 26, 2022

myself

Distance to: Torziok12b
10.52441447 XAN030_56.96%cov
12.98159081 XAN051_33.58%cov
14.10970234 MYG002_38.92%cov
15.07711842 KRO009_52.77%cov
15.59644511 MYG005_61.51%cov
15.94243708 AID017_25.08%cov
16.42843876 MYG008_72.34%cov
16.73547131 MYG006_76.25%cov
17.46925299 MYG001_51.65%cov
19.57784462 XAN042_7.54%cov
19.98220959 XAN040_13.20%cov
21.15793704 MYG003_78.18%cov
21.64013170 KRO008_20.11%cov
22.13996838 APO038_2.62%cov
22.18464559 MYG004_79.26%cov
22.64206925 XAN023_56.78%cov
22.92103619 AID007_78.09%cov
23.57960559 AID008_79.55%cov
23.66309997 AID001_77.84%cov
24.19269931 AID010_6.95%cov
24.44192914 AID009_13.93%cov
24.71063941 KUK006_86.95%cov
25.83173049 KUK001_68.71%cov
26.00364590 LAZ021_15.72%cov
26.06477316 AID014_15.45%cov

Target: Torziok12b
Distance: 10.5244% / 10.52441447
100.0 XAN030_56.96%cov

Stuvanè · Dec 26, 2022

Source #43

Distance to:	Dodecadk12bStuvanè
6.13688031	XAN030_56.96%cov
7.63521447	XAN051_33.58%cov
8.62498116	MYG002_38.92%cov
9.51383729	KRO009_52.77%cov
10.24996585	MYG008_72.34%cov
10.40730032	MYG005_61.51%cov
10.49121537	MYG006_76.25%cov
10.75673278	AID017_25.08%cov
12.62997229	MYG001_51.65%cov
13.38715056	XAN042_7.54%cov
14.57934498	MYG003_78.18%cov
15.22797754	KRO008_20.11%cov
15.32872141	XAN040_13.20%cov
16.12142674	APO038_2.62%cov
16.63744271	AID007_78.09%cov
16.92079490	MYG004_79.26%cov
17.45671218	AID008_79.55%cov
17.54680313	AID001_77.84%cov
17.75352641	XAN023_56.78%cov
18.12479793	AID009_13.93%cov
18.46655626	KUK006_86.95%cov
18.88497021	AID010_6.95%cov
19.77202064	LAZ021_15.72%cov
19.77375281	KUK001_68.71%cov
19.91951807	GLI003_78.73%cov

Target: Dodecadk12bStuvanè Distance: 5.9286% / 5.92856473
80.0	XAN030_56.96%cov

12.8	MYG006_76.25%cov

7.2	XAN051_33.58%cov

Distance to:	Dodecadk12bStuvanè
5.93859786	15.20% MYG006_76.25%cov + 84.80% XAN030_56.96%cov
6.02522066	80.00% XAN030_56.96%cov + 20.00% XAN051_33.58%cov
6.05910770	13.60% MYG002_38.92%cov + 86.40% XAN030_56.96%cov
6.09334626	3.60% AID012_3.11%cov + 96.40% XAN030_56.96%cov
6.10768560	6.80% MYG008_72.34%cov + 93.20% XAN030_56.96%cov
6.12623058	2.60% MYG003_78.18%cov + 97.40% XAN030_56.96%cov
6.12814869	97.40% XAN030_56.96%cov + 2.60% XAN042_7.54%cov
7.48436175	26.00% MYG002_38.92%cov + 74.00% XAN051_33.58%cov
7.55558662	13.20% MYG006_76.25%cov + 86.80% XAN051_33.58%cov
8.44347849	20.80% AID017_25.08%cov + 79.20% MYG002_38.92%cov
8.60686722	91.20% MYG002_38.92%cov + 8.80% MYG005_61.51%cov
9.09913754	47.60% AID017_25.08%cov + 52.40% MYG006_76.25%cov
9.17436553	31.00% AID017_25.08%cov + 69.00% KRO009_52.77%cov
9.47026596	82.60% KRO009_52.77%cov + 17.40% MYG005_61.51%cov
9.47208096	83.60% KRO009_52.77%cov + 16.40% MYG006_76.25%cov
9.48206836	83.40% KRO009_52.77%cov + 16.60% MYG008_72.34%cov
9.55974802	45.40% AID017_25.08%cov + 54.60% MYG005_61.51%cov
9.57279070	42.80% AID017_25.08%cov + 57.20% MYG008_72.34%cov
9.91513887	52.00% MYG005_61.51%cov + 48.00% MYG006_76.25%cov
10.01950399	66.20% AID017_25.08%cov + 33.80% MYG001_51.65%cov
10.12317502	36.80% MYG006_76.25%cov + 63.20% MYG008_72.34%cov
10.15011904	11.20% AID012_3.11%cov + 88.80% MYG005_61.51%cov
10.18213792	35.40% MYG005_61.51%cov + 64.60% MYG008_72.34%cov
10.40790178	89.60% MYG006_76.25%cov + 10.40% XAN040_13.20%cov
10.46106718	81.80% AID017_25.08%cov + 18.20% XAN040_13.20%cov

Target: Dodecadk12bStuvanè Distance: 5.9286% / 5.92856473
80.0	XAN030_56.96%cov

12.8	MYG006_76.25%cov

7.2	XAN051_33.58%cov

Angela · Dec 26, 2022

Distance to:	Angela
7.25111026	MYG001_51.65%cov
7.55980820	MYG005_61.51%cov
7.73159104	MYG002_38.92%cov
8.01834771	KRO009_52.77%cov
8.92572126	XAN051_33.58%cov
8.95371431	MYG008_72.34%cov
9.10321921	MYG006_76.25%cov
9.27554311	XAN030_56.96%cov
11.73214814	MYG004_79.26%cov
12.61049959	XAN023_56.78%cov
13.16148168	XAN042_7.54%cov
13.17628552	AID017_25.08%cov
13.36185242	XAN040_13.20%cov
13.80711773	MYG003_78.18%cov
14.33918059	KRO008_20.11%cov
14.55109274	AID007_78.09%cov
14.58665829	APO038_2.62%cov
14.63215979	AID010_6.95%cov
14.82485076	AID008_79.55%cov
15.54170197	AID001_77.84%cov
15.55961118	KUK006_86.95%cov
16.44675044	AID014_15.45%cov
17.15355065	KUK001_68.71%cov
17.31764418	LAZ021_15.72%cov
17.51841317	XAN021_59.97%cov

Target: Angela Distance: 6.1867% / 6.18665639
60.4	MYG001_51.65%cov

30.9	XAN030_56.96%cov

8.7	MYG002_38.92%cov

Distance to:	Angela
6.20053217	64.80% MYG001_51.65%cov + 35.20% XAN030_56.96%cov
6.56035190	57.00% MYG001_51.65%cov + 43.00% MYG002_38.92%cov
6.72377034	68.40% MYG001_51.65%cov + 31.60% XAN051_33.58%cov
6.93910026	46.80% MYG002_38.92%cov + 53.20% MYG005_61.51%cov
6.95148925	34.00% KRO009_52.77%cov + 66.00% MYG001_51.65%cov
6.98512469	59.80% MYG001_51.65%cov + 40.20% MYG005_61.51%cov
7.17415928	71.20% MYG005_61.51%cov + 28.80% XAN030_56.96%cov
7.21577540	88.60% MYG001_51.65%cov + 11.40% MYG006_76.25%cov
7.22741135	5.00% AID017_25.08%cov + 95.00% MYG001_51.65%cov
7.30953223	37.00% KRO009_52.77%cov + 63.00% MYG005_61.51%cov
7.34582214	38.20% MYG004_79.26%cov + 61.80% XAN030_56.96%cov
7.36534817	74.80% MYG005_61.51%cov + 25.20% XAN051_33.58%cov
7.38453439	9.40% APO029_21.43%cov + 90.60% MYG002_38.92%cov
7.43925348	79.60% MYG005_61.51%cov + 20.40% MYG006_76.25%cov
7.48222817	82.20% MYG002_38.92%cov + 17.80% MYG004_79.26%cov
7.54010622	76.00% MYG002_38.92%cov + 24.00% XAN030_56.96%cov
7.55431318	86.00% MYG002_38.92%cov + 14.00% XAN023_56.78%cov
7.55978226	0.20% MYG004_79.26%cov + 99.80% MYG005_61.51%cov
7.57497848	87.60% MYG002_38.92%cov + 12.40% XAN040_13.20%cov
7.58211497	6.60% APO004_31.39%cov + 93.40% MYG002_38.92%cov
7.63551633	5.20% APO043_17.92%cov + 94.80% MYG002_38.92%cov
7.63741886	6.40% GLI002_5.21%cov + 93.60% MYG002_38.92%cov
7.64059385	79.60% MYG002_38.92%cov + 20.40% XAN051_33.58%cov
7.64182501	8.60% AID010_6.95%cov + 91.40% MYG002_38.92%cov
7.64367046	32.40% KRO009_52.77%cov + 67.60% MYG002_38.92%cov

Target: Angela Distance: 6.1867% / 6.18665639
60.4	MYG001_51.65%cov

30.9	XAN030_56.96%cov

8.7	MYG002_38.92%cov

Palermo Trapani · Dec 26, 2022

Salento: Thanks again. Great work, hope you enjoyed some good Italian food and wine with your family for Christmas!. You have been really busy getting these coordinates out to the members here. Many, many, thanks. PT

My top 25 distances and 2 and 3-way admixture models:

Distance to:	PalermoTrapani_ANCESTRY
5.91870763	APO038_2.62%cov
6.80688622	MYG008_72.34%cov
6.85733184	MYG003_78.18%cov
7.27191859	AID001_77.84%cov
7.50045332	MYG005_61.51%cov
8.01035580	AID007_78.09%cov
8.51993545	AID008_79.55%cov
8.53646882	XAN042_7.54%cov
8.73668129	KUK001_68.71%cov
8.77149930	KRO008_20.11%cov
8.85510587	XAN027_37.22%cov
8.90842298	AID017_25.08%cov
9.21955530	KUK006_86.95%cov
9.29902683	AID002_74.78%cov
9.80698730	KRO009_52.77%cov
9.91069120	XAN051_33.58%cov
10.11430176	MYG006_76.25%cov
10.13300054	GLI003_78.73%cov
10.24037597	XAN026_27.23%cov
10.42399156	KUK005_90.15%cov
10.46963705	MYG001_51.65%cov
10.57207170	LAZ021_15.72%cov
10.73959031	AID010_6.95%cov
10.74652502	XAN023_56.78%cov
10.82231029	TIR002_64.56%cov

Target: PalermoTrapani_ANCESTRY Distance: 4.1789% / 4.17890129 \| R2P
60.0	MYG005_61.51%cov

40.0	XAN026_27.23%cov

Target: PalermoTrapani_ANCESTRY Distance: 3.1780% / 3.17803466 \| R3P
52.8	MYG005_61.51%cov

29.2	XAN026_27.23%cov

18.0	XAN007_4.59%cov

torzio · Dec 26, 2022

torzio said:
myself
Distance to: Torziok12b
10.52441447 XAN030_56.96%cov
12.98159081 XAN051_33.58%cov
14.10970234 MYG002_38.92%cov
15.07711842 KRO009_52.77%cov
15.59644511 MYG005_61.51%cov
15.94243708 AID017_25.08%cov
16.42843876 MYG008_72.34%cov
16.73547131 MYG006_76.25%cov
17.46925299 MYG001_51.65%cov
19.57784462 XAN042_7.54%cov
19.98220959 XAN040_13.20%cov
21.15793704 MYG003_78.18%cov
21.64013170 KRO008_20.11%cov
22.13996838 APO038_2.62%cov
22.18464559 MYG004_79.26%cov
22.64206925 XAN023_56.78%cov
22.92103619 AID007_78.09%cov
23.57960559 AID008_79.55%cov
23.66309997 AID001_77.84%cov
24.19269931 AID010_6.95%cov
24.44192914 AID009_13.93%cov
24.71063941 KUK006_86.95%cov
25.83173049 KUK001_68.71%cov
26.00364590 LAZ021_15.72%cov
26.06477316 AID014_15.45%cov
Target: Torziok12b
Distance: 10.5244% / 10.52441447
100.0 XAN030_56.96%cov

at Salento

HGC010-039 T-M70

HGC055-065 T-M70

Salento · Dec 27, 2022

torzio said:
at Salento

HGC010-039 T-M70

HGC055-065 T-M70

HGC055 might be y T1a3b, though I can only work with the data that I have, maybe they have better data than mine, or maybe not

Palermo Trapani · Dec 27, 2022

Question, is there a Pre-Print for this paper available on biovrx? I used the title in the first post, could not find it.

Jovialis · Dec 27, 2022

Palermo Trapani said:
Question, is there a Pre-Print for this paper available on biovrx? I used the title in the first post, could not find it.

I'd like to see it too.

Anyone have a link to the archaeological ids?

kingjohn · Dec 27, 2022

GLI002 is in theytree he could be e-m84
https://www.theytree.com/tree/E-S9621
So snipsa was correct
I am sorry if i doubted teepean tool
I guess his tool can handle normal coverage of y calls

P.s
The ytree send me the calls
It for sure is e-pf1962 derived

In better coverage maybe could be e-m84> pf6751
Anyway i wonder what is date maybe iron age
Can't wait for this paper

Jovialis · Dec 27, 2022

Multi with the samples from this study:

Multi with the samples from all Ancient Greek samples:

Ancient DNA, admx. history and endogamy in the prehistoricAegean Skourtaniotietal2022

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