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Admixtools Modelling Spain_Carolingian (Medieval) in qpAdm and G25

Jalisciense

Regular Member
Messages
103
Reaction score
54
Points
28
Ethnic group
Spanish, Morisco, Sephardic Jew, Indigenous Mexican, Senegambian, Yoruba & Central Bantus
Y-DNA haplogroup
E1b>M183>PF2546
mtDNA haplogroup
B2g1
qpAdm


Left populations

-Iberian IA (36 samples/individuals): Spain_IA, Spain_LIA, Spain_IA_Celt, Spain_IA_Tartessian, Spain_EIA_Tartessian, Spain_Roman_oLocal, Spain_Hellenistic_oLocal, Spain_Classical_Greek_Iberian, Spain_LateArchaic_Greek_Iberian and Spain_LateArchaic_Classical_Hellenistic_Greek_Iberian.

-Roman (52 samples/individuals): Italy_Pompeii_Roman, Italy_Imperial and Italy_LateAntiquity.


Right populations/Outgroup

-Mbuti, Iran N, WHG, Morocco EN, Levant N, Yamnaya EBA and EHG.


*Pass

Code:
full rank
f4info:
f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 5 chisqdiff: 7.901 taildiff: 0.161768375
B:
          scale 401.558 136.046
Iran_TepeAbdulHosein_N.SG 0.623 0.434
Luxembourg_Mesolithic.DG 1.885 -1.792
Morocco_EN.WGC.SG -0.344 -0.165
 Jordan_PPNC.AG -0.220 -0.318
Russia_Caucasus_EBA_Yamnaya.AG 1.014 -0.725
Russia_YuzhniyOleniyOstrov_Mesolithic.AG 0.929 -1.395
A:
          scale 1.414 1.414
     Iberian_IA 1.414 0.000
          Roman 0.000 1.414


best coefficients: 0.818 0.182
totmean: 0.818 0.182
zzevarboot
    0.840592936 0.159407064
    0.001500382
   -0.007911886
zzevarboot2
    0.786280706 0.213719294
    0.002037084
   -0.007494505
boot mean: 0.818 0.182
bootstrap saimpling of F-coeffs: 1000
zzjmean 0.818 0.182
      std. errors: 0.051 0.051

error covariance (* 1,000,000)
      2589 -2589
     -2589 2589


summ: Spain_Carolingian.AG 2 0.161768 0.818 0.182 2589 -2589 2589

    fixed pat wt dof chisq tail prob
           00 0 5 7.901 0.161768 0.818 0.182
           01 1 6 19.561 0.0033138 1.000 0.000
           10 1 6 264.409 0 0.000 1.000
best pat: 00 0.161768 - -
best pat: 01 0.0033138 chi(nested): 11.660 p-value for nested model: 0.000638586

coeffs: 0.818 0.182

P-value: 0.161768
Standard Errors/SE: 5.1% and 5.1%
Z-scores: 16.04 and 3.57
Spain_Carolingian can be modeled as 81.8% Iberian_IA and 18.2% Roman.


Global25/G25

R+nMonte3

Unscaled

[1] "penalty= 0.001"
[1] "Ncycles= 1000"
[1] "distance%=1.5639"

Spain_Carolingian

Iberian_IA,72
Roman,28


Vahaduo

Scaled

Target: Spain_Carolingian
Distance: 2.2853% / 0.02285283

74.4 Iberian_IA
25.6 Roman
 
Last edited:
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