Twilight
Regular Member
- Messages
- 956
- Reaction score
- 93
- Points
- 28
- Location
- Clinton, Washington
- Ethnic group
- 15/32 British, 5/32 German, 9/64 Irish, 1/8 Scots Gaelic, 5/64 French, 1/32 Welsh
- Y-DNA haplogroup
- R1b-U152-Z56-BY3957
- mtDNA haplogroup
- J1c7a
Paleolithic (Dzudzuana, ANE, WHG, etc.) ancestry table of G25+qpAdm models+coords
(Credit goes to ILoveHistory of Anthrogenica)
G25 Calculator Code for exploreyourdna.com
Caucasus_Dzudzuana_24.000bc(Barcin_N_is_98%_Dzudzu):Anatolian_Neolithic_Farmer:TUR_Barcin_N,0.1175998,0.180118,0.0035312,-0.101158,0.0510443,-0.0483875,-0.0043582,-0.0069334,0.0362287,0.0807473,0.0079718,0.0118803,-0.0234545,0.0004691,-0.0419807,-0.0101913,0.0233091,0.0019866,0.0136954,-0.0097489,-0.0142249,0.0057723,-0.0041232,-0.0031658,-0.0043437
West_Europe_Hunter_Gatherer_12.000bc(Villabruna),0.121791,0.114755,0.18592,0.184111,0.156337,0.060798,0.020211,0.035998,0.092445,0.018041,-0.016239,-0.016186,0.016947,-0.010046,0.054017,0.067356,0.000782,0.005448,-0.008422,0.053526,0.100073,0.010758,-0.048313,-0.163517,0.01928
Ancient_North_Eurasian_15.000bc(AG3),0.093335,-0.01828,0.083344,0.231592,-0.091402,0.042949,-0.063688,-0.078228,-0.035383,-0.096221,0.047417,-0.010491,0.023637,-0.074454,0.020358,0.02254,-0.012908,0.003801,-0.003394,0.000625,-0.03706,0.015209,0.013927,0.009278,-0.005149
Basal_East_Eurasian_37615bc(Tianyuan),-0.027318,-0.260991,-0.075424,0.071383,0.033545,-0.018407,-0.00799,-0.003,0.040291,0.021322,-0.006333,-0.005995,-0.003568,-0.00523,-0.000407,-0.000663,0.008084,0.002407,-0.001131,0.027263,-0.001747,0.008037,-0.008874,-0.010845,0.011256
East_Eurasian(Amur_River):CHN_Amur_River_19000BP:NE56___BC_17477___Coverage_66.05%,0.006829,-0.427538,0.017348,-0.047804,0.015695,-0.004462,-0.003055,-0.010384,0.001636,0.00656,-0.034914,-0.005995,0.006838,-0.002615,-0.005836,-0.00358,0.004433,-0.000507,0.006285,-0.001626,0.01722,-0.014467,0.00493,-0.007953,-0.012334
Ancestral_North_African(Mota),-0.515619,0.041637,-0.003394,-0.001292,-0.00277,-0.011713,0.054992,-0.052382,0.090604,-0.094581,-0.013478,0.003297,-0.031962,-0.001927,0.023615,-0.031291,0.031944,0.043454,-0.002388,-0.00963,-0.001248,0.00643,-0.005176,-0.003133,0.004071
Sub_Saharan_African(Mbo),-0.6299838,0.0642685,0.0217293,0.0171959,0,0.0123643,-0.026198,0.0295042,-0.0372623,0.020315,0.0004329,-0.0030258,0.0052456,0.0015008,-0.0011957,0.002557,-0.0020923,0.0004827,-0.0005926,0.0015365,0.0017766,0.0018547,0.0014144,-0.0011476,-0.0009922
(Credit goes to ILoveHistory of Anthrogenica)
I made sure that the results are correct by the qpAdm models from the paper
Supplementary material: https://www.biorxiv.org/content/bior...1/423079-1.pdf
Excel table of Paleolithic ancestry
In case you wonder why in the paper Norwegians and some other North Europeans score so much Dzudzuana is because in the models where they didn't use an African proxy their Dzudzuana score is inflated because ANF had 1-2% Ancestral North African admix so it caused more Neanderthal admix dilution. Since qpAdm didn't have an African proxy to dilute Neanderthal ancestry more it just added more Dzudzuana which has 28% Basal Eurasian. The reason why they didn't use an African proxy for some is because when they use Villabruna(WHG) and Mbuti(African) together as proxies they cause high STD errors.
I also reconfirmed the G25 results by calculating indirect Dzudzuana ancestry though ANF, PPNB, Natufian, Taforalt, CHG, Iran N scores in qpAdm and G25 and based on their Dzudzuana ancestry from the paper.
Because i used ANF Barcin_N as a proxy which has around 1.6% Ancestral North African (ANA) i had to calculate manually the ANA ancestry in some Europeans. Populations that had excess ANA from PPNB/Natufian/Taforalt did not need a manual adjustment because their ANA was a bit inflated and it made up for the ANA % ANF "stole".
qpGraph tree from the paper:
I highlighted important parts. I might've made a mistake where i drew the line for the East Eurasian in EHG but whatever it's fine.
qpAdm models from the paper:
Supplementary material: https://www.biorxiv.org/content/bior...1/423079-1.pdf
Excel table of Paleolithic ancestry
In case you wonder why in the paper Norwegians and some other North Europeans score so much Dzudzuana is because in the models where they didn't use an African proxy their Dzudzuana score is inflated because ANF had 1-2% Ancestral North African admix so it caused more Neanderthal admix dilution. Since qpAdm didn't have an African proxy to dilute Neanderthal ancestry more it just added more Dzudzuana which has 28% Basal Eurasian. The reason why they didn't use an African proxy for some is because when they use Villabruna(WHG) and Mbuti(African) together as proxies they cause high STD errors.
I also reconfirmed the G25 results by calculating indirect Dzudzuana ancestry though ANF, PPNB, Natufian, Taforalt, CHG, Iran N scores in qpAdm and G25 and based on their Dzudzuana ancestry from the paper.
Because i used ANF Barcin_N as a proxy which has around 1.6% Ancestral North African (ANA) i had to calculate manually the ANA ancestry in some Europeans. Populations that had excess ANA from PPNB/Natufian/Taforalt did not need a manual adjustment because their ANA was a bit inflated and it made up for the ANA % ANF "stole".
qpGraph tree from the paper:
I highlighted important parts. I might've made a mistake where i drew the line for the East Eurasian in EHG but whatever it's fine.
qpAdm models from the paper:
G25 Calculator Code for exploreyourdna.com
Caucasus_Dzudzuana_24.000bc(Barcin_N_is_98%_Dzudzu):Anatolian_Neolithic_Farmer:TUR_Barcin_N,0.1175998,0.180118,0.0035312,-0.101158,0.0510443,-0.0483875,-0.0043582,-0.0069334,0.0362287,0.0807473,0.0079718,0.0118803,-0.0234545,0.0004691,-0.0419807,-0.0101913,0.0233091,0.0019866,0.0136954,-0.0097489,-0.0142249,0.0057723,-0.0041232,-0.0031658,-0.0043437
West_Europe_Hunter_Gatherer_12.000bc(Villabruna),0.121791,0.114755,0.18592,0.184111,0.156337,0.060798,0.020211,0.035998,0.092445,0.018041,-0.016239,-0.016186,0.016947,-0.010046,0.054017,0.067356,0.000782,0.005448,-0.008422,0.053526,0.100073,0.010758,-0.048313,-0.163517,0.01928
Ancient_North_Eurasian_15.000bc(AG3),0.093335,-0.01828,0.083344,0.231592,-0.091402,0.042949,-0.063688,-0.078228,-0.035383,-0.096221,0.047417,-0.010491,0.023637,-0.074454,0.020358,0.02254,-0.012908,0.003801,-0.003394,0.000625,-0.03706,0.015209,0.013927,0.009278,-0.005149
Basal_East_Eurasian_37615bc(Tianyuan),-0.027318,-0.260991,-0.075424,0.071383,0.033545,-0.018407,-0.00799,-0.003,0.040291,0.021322,-0.006333,-0.005995,-0.003568,-0.00523,-0.000407,-0.000663,0.008084,0.002407,-0.001131,0.027263,-0.001747,0.008037,-0.008874,-0.010845,0.011256
East_Eurasian(Amur_River):CHN_Amur_River_19000BP:NE56___BC_17477___Coverage_66.05%,0.006829,-0.427538,0.017348,-0.047804,0.015695,-0.004462,-0.003055,-0.010384,0.001636,0.00656,-0.034914,-0.005995,0.006838,-0.002615,-0.005836,-0.00358,0.004433,-0.000507,0.006285,-0.001626,0.01722,-0.014467,0.00493,-0.007953,-0.012334
Ancestral_North_African(Mota),-0.515619,0.041637,-0.003394,-0.001292,-0.00277,-0.011713,0.054992,-0.052382,0.090604,-0.094581,-0.013478,0.003297,-0.031962,-0.001927,0.023615,-0.031291,0.031944,0.043454,-0.002388,-0.00963,-0.001248,0.00643,-0.005176,-0.003133,0.004071
Sub_Saharan_African(Mbo),-0.6299838,0.0642685,0.0217293,0.0171959,0,0.0123643,-0.026198,0.0295042,-0.0372623,0.020315,0.0004329,-0.0030258,0.0052456,0.0015008,-0.0011957,0.002557,-0.0020923,0.0004827,-0.0005926,0.0015365,0.0017766,0.0018547,0.0014144,-0.0011476,-0.0009922
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