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Antonio M. et al 2019 - Iron Age Samples Raw Data

Jovialis

Jovialis

Advisor
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Ethnic group
Italian
Y-DNA haplogroup
R1b-PF7566>Y227216
mtDNA haplogroup
H6a1b7
Last edited:
Thank you for hard work.
 
My pleasure! :)
 
Jovialis said:
Here are the Iron Age samples from Ancient Rome: A genetic crossroads of Europe and the Mediterranean

I used WGS extract to "convert" the files from BAM to usable raw data, in WGS combined, as well as AncestryDNA format.

http://www.mediafire.com/file/hzqdryr37t7s0cm/Antonio_M._et_al_2019_-_Iron_Age_Samples.zip/file


These files do not work on Gedmatch, they get status Percent HTZ out of range

But they do work on Admixture Studio.

Enjoy!
Click to expand...

the R1 files do work on GedMatch :)
I haven’t tested the others.
 
Nice! good to know, R850, and R437 were getting the HTZ out of range error.
 
I read, this HTZ function was to prevent uploading artificial genomes to Gedmatch. But they killed Ancient samples too...
 
Jovialis said:
Nice! good to know, R850, and R437 were getting the HTZ out of range error.
Click to expand...

R1 works......just tried it ...see below

[h=2]Jtest Oracle results:[/h]Jtest Oracle population reference data revised 06 Nov 2012.

Kit AG4512653

Admix Results (sorted):

Population

[TD="align: center"] # [/TD]

[TD="align: right"] Percent [/TD]

[TD="width: 30, align: center"]1[/TD]
[TD="width: 120"]WEST_MED[/TD]
[TD="width: 50, align: right"]19.01[/TD]

[TD="width: 30, align: center"]2[/TD]
[TD="width: 120"]ATLANTIC[/TD]
[TD="width: 50, align: right"]18.22[/TD]

[TD="width: 30, align: center"]3[/TD]
[TD="width: 120"]EAST_MED[/TD]
[TD="width: 50, align: right"]16.57[/TD]

[TD="width: 30, align: center"]4[/TD]
[TD="width: 120"]NORTH-CENTRAL_EURO[/TD]
[TD="width: 50, align: right"]14.74[/TD]

[TD="width: 30, align: center"]5[/TD]
[TD="width: 120"]SOUTH_BALTIC[/TD]
[TD="width: 50, align: right"]7.61[/TD]

[TD="width: 30, align: center"]6[/TD]
[TD="width: 120"]ASHKENAZI[/TD]
[TD="width: 50, align: right"]6.96[/TD]

[TD="width: 30, align: center"]7[/TD]
[TD="width: 120"]WEST_ASIAN[/TD]
[TD="width: 50, align: right"]6.83[/TD]

[TD="width: 30, align: center"]8[/TD]
[TD="width: 120"]EAST_EURO[/TD]
[TD="width: 50, align: right"]6.82[/TD]

[TD="width: 30, align: center"]9[/TD]
[TD="width: 120"]MIDDLE_EASTERN[/TD]
[TD="width: 50, align: right"]2.49[/TD]

[TD="width: 30, align: center"]10[/TD]
[TD="width: 120"]SIBERIAN[/TD]
[TD="width: 50, align: right"]0.65[/TD]

[TD="width: 30, align: center"]11[/TD]
[TD="width: 120"]WEST_AFRICAN[/TD]
[TD="width: 50, align: right"]0.1[/TD]

Single Population Sharing:

Population (source)

[TD="align: center"] # [/TD]

[TD="align: right"] Distance [/TD]

[TD="width: 40, align: center"]1[/TD]
[TD="width: 220"]North_Italian[/TD]
[TD="width: 50, align: right"]4.85[/TD]

[TD="width: 40, align: center"]2[/TD]
[TD="width: 220"]Tuscan[/TD]
[TD="width: 50, align: right"]7.02[/TD]

[TD="width: 40, align: center"]3[/TD]
[TD="width: 220"]PT[/TD]
[TD="width: 50, align: right"]10.47[/TD]

[TD="width: 40, align: center"]4[/TD]
[TD="width: 220"]ES[/TD]
[TD="width: 50, align: right"]11.93[/TD]

[TD="width: 40, align: center"]5[/TD]
[TD="width: 220"]RO[/TD]
[TD="width: 50, align: right"]12.34[/TD]

[TD="width: 40, align: center"]6[/TD]
[TD="width: 220"]FR[/TD]
[TD="width: 50, align: right"]13.05[/TD]

[TD="width: 40, align: center"]7[/TD]
[TD="width: 220"]Serbian[/TD]
[TD="width: 50, align: right"]13.4[/TD]

[TD="width: 40, align: center"]8[/TD]
[TD="width: 220"]AT[/TD]
[TD="width: 50, align: right"]15.51[/TD]

[TD="width: 40, align: center"]9[/TD]
[TD="width: 220"]South_Italian_&_Sicilian[/TD]
[TD="width: 50, align: right"]15.79[/TD]

[TD="width: 40, align: center"]10[/TD]
[TD="width: 220"]HU[/TD]
[TD="width: 50, align: right"]17.48[/TD]

[TD="width: 40, align: center"]11[/TD]
[TD="width: 220"]GR[/TD]
[TD="width: 50, align: right"]17.72[/TD]

[TD="width: 40, align: center"]12[/TD]
[TD="width: 220"]West_&_Central_German[/TD]
[TD="width: 50, align: right"]19.23[/TD]

[TD="width: 40, align: center"]13[/TD]
[TD="width: 220"]NL[/TD]
[TD="width: 50, align: right"]20.17[/TD]

[TD="width: 40, align: center"]14[/TD]
[TD="width: 220"]Cornish[/TD]
[TD="width: 50, align: right"]20.55[/TD]

[TD="width: 40, align: center"]15[/TD]
[TD="width: 220"]English[/TD]
[TD="width: 50, align: right"]21.29[/TD]

[TD="width: 40, align: center"]16[/TD]
[TD="width: 220"]Orcadian[/TD]
[TD="width: 50, align: right"]22.93[/TD]

[TD="width: 40, align: center"]17[/TD]
[TD="width: 220"]IE[/TD]
[TD="width: 50, align: right"]23.07[/TD]

[TD="width: 40, align: center"]18[/TD]
[TD="width: 220"]DK[/TD]
[TD="width: 50, align: right"]23.65[/TD]

[TD="width: 40, align: center"]19[/TD]
[TD="width: 220"]Scottish[/TD]
[TD="width: 50, align: right"]24.13[/TD]

[TD="width: 40, align: center"]20[/TD]
[TD="width: 220"]NO[/TD]
[TD="width: 50, align: right"]25.24[/TD]

Mixed Mode Population Sharing:

+ @
+ @
+ @
+ @
+ @
+ @
+ @
+ @
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+ @
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[TD="width: 20, align: center"] # [/TD]
[TD="width: 15"] [/TD]
[TD="colspan: 3"] Primary Population (source) [/TD]
[TD="colspan: 3"] Secondary Population (source) [/TD]
[TD="align: right"] Distance [/TD]

[TD="width: 20, align: center"]1[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]58%[/TD]
[TD="width: 200"] FR[/TD]

[TD="width: 30, align: right"]42%[/TD]
[TD="width: 200"] GR[/TD]

[TD="width: 50, align: right"]3.35[/TD]

[TD="width: 20, align: center"]2[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]85.3%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]14.7%[/TD]
[TD="width: 200"] Erzya[/TD]

[TD="width: 50, align: right"]3.41[/TD]

[TD="width: 20, align: center"]3[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]84.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]15.8%[/TD]
[TD="width: 200"] East_Russian[/TD]

[TD="width: 50, align: right"]3.44[/TD]

[TD="width: 20, align: center"]4[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]85.4%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]14.6%[/TD]
[TD="width: 200"] North_Russian[/TD]

[TD="width: 50, align: right"]3.47[/TD]

[TD="width: 20, align: center"]5[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]86.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]13.8%[/TD]
[TD="width: 200"] Udmurt[/TD]

[TD="width: 50, align: right"]3.65[/TD]

[TD="width: 20, align: center"]6[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]83.7%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]16.3%[/TD]
[TD="width: 200"] West_Russian[/TD]

[TD="width: 50, align: right"]3.74[/TD]

[TD="width: 20, align: center"]7[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]71.8%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]28.2%[/TD]
[TD="width: 200"] AT[/TD]

[TD="width: 50, align: right"]3.78[/TD]

[TD="width: 20, align: center"]8[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]84.1%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]15.9%[/TD]
[TD="width: 200"] South_Finnish[/TD]

[TD="width: 50, align: right"]3.83[/TD]

[TD="width: 20, align: center"]9[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]85.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]14.8%[/TD]
[TD="width: 200"] East_Finnish[/TD]

[TD="width: 50, align: right"]3.85[/TD]

[TD="width: 20, align: center"]10[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]74.4%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]25.6%[/TD]
[TD="width: 200"] HU[/TD]

[TD="width: 50, align: right"]3.85[/TD]

[TD="width: 20, align: center"]11[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]92.8%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]7.2%[/TD]
[TD="width: 200"] Udmurt[/TD]

[TD="width: 50, align: right"]3.88[/TD]

[TD="width: 20, align: center"]12[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]93%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]7%[/TD]
[TD="width: 200"] Komi[/TD]

[TD="width: 50, align: right"]3.91[/TD]

[TD="width: 20, align: center"]13[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]93.2%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]6.8%[/TD]
[TD="width: 200"] Lezgin[/TD]

[TD="width: 50, align: right"]3.96[/TD]

[TD="width: 20, align: center"]14[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]82.1%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]17.9%[/TD]
[TD="width: 200"] Serbian[/TD]

[TD="width: 50, align: right"]3.97[/TD]

[TD="width: 20, align: center"]15[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]84%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]16%[/TD]
[TD="width: 200"] Ukrainian-Russian[/TD]

[TD="width: 50, align: right"]3.97[/TD]

[TD="width: 20, align: center"]16[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]81.7%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]18.3%[/TD]
[TD="width: 200"] RO[/TD]

[TD="width: 50, align: right"]4.09[/TD]

[TD="width: 20, align: center"]17[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]93.2%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]6.8%[/TD]
[TD="width: 200"] IR[/TD]

[TD="width: 50, align: right"]4.09[/TD]

[TD="width: 20, align: center"]18[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]86.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]13.8%[/TD]
[TD="width: 200"] Northwest_Russian[/TD]

[TD="width: 50, align: right"]4.11[/TD]

[TD="width: 20, align: center"]19[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]83.5%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]16.5%[/TD]
[TD="width: 200"] PL[/TD]

[TD="width: 50, align: right"]4.11[/TD]

[TD="width: 20, align: center"]20[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]55.2%[/TD]
[TD="width: 200"] FR[/TD]

[TD="width: 30, align: right"]44.8%[/TD]
[TD="width: 200"] South_Italian_&_Sicilian[/TD]

[TD="width: 50, align: right"]4.11[/TD]
 
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