Bosnian_10,3.06,0.44,0,0.55,27.00,42.48,0,0.33,4.98,0,21.15,0
Bosnian_11,5.64,0.03,0.96,0,25.33,42.04,0,0,4.77,0,21.23,0
Bosnian_12,5.24,0.63,0.40,0,25.12,43.50,0.64,0,5.50,0,18.96,0
Bosnian_13,5.51,0,0.23,0,25.26,41.18,1.93,0,5.16,0,20.73,0
Bosnian_14,4.40,1.23,0,0.54,25.72,42.67,0,0,4.39,0,21.04,0
Bosnian_15,5.01,0.20,1.81,0,27.25,47.94,0,0,2.84,0,14.89,0.06
Bosnian_16,5.95,0,0.44,0,27.26,39.69,0.52,0,4.98,0,21.15,0
Bosnian_2,4.84,0.29,0,0,25.16,44.53,0.93,0.14,3.38,0.19,20.54,0
Bosnian_3,5.54,0.23,0.75,0.42,26.23,39.63,0.49,0,3.24,0.09,23.39,0
Bosnian_4,4.08,1.33,0.36,0,24.07,44.11,0,0.16,4.94,0,20.95,0
Bosnian_5,4.60,0.64,0,0,26.63,44.10,1.12,0,4.45,0,18.40,0.08
Bosnian_7,4.52,1.31,0.93,0.13,23.41,44.39,0.12,0.08,5.11,0,20,0
Bosnian_8,5.01,0.62,0,0,27.23,42.26,0.73,0.08,5.04,0.09,18.95,0
Kosovo1,5.40,0.63,0.60,0,30.94,24.44,0,0,7.22,0,30.63,0.14
Kosovo11,5.19,1.12,1.28,0,28.15,27.51,0,0,7.60,0.11,29.04,0
Kosovo12,7.44,0,1.12,0,28.84,27.85,1.71,0,7.53,0,25.49,0
Kosovo14,4.96,0,0,0,31.77,28.45,0,0,5.97,0,28.85,0
Kosovo16,6.85,0,0.46,0.39,29.54,26.37,0.27,0,7.17,0,28.95,0
Kosovo18,7.62,0.02,1.15,0,26.29,28.10,0.22,0,9.87,0,26.73,0
Kosovo7,4.68,0.17,0.35,0.54,29.29,26.60,0,0.09,8.87,0,29.41,0
Kosovo8,6.84,0.11,1.01,0,28.83,25.39,0,0,6.35,0.39,31.08,0
Macedonian12,6.37,0.52,0.85,0,23.90,34.46,0,0,7.66,0,26.24,0
Macedonian17b-d,4.48,0.12,1.17,0,27.66,31.85,0,0,7.43,0.72,26.58,0
Macedonian19,5.08,0.81,0,0,28.13,33.31,0.18,0,6.54,0.08,25.86,0
Macedonian20,7.09,0,0.58,0.32,24.55,35.80,0.65,0,5.13,0,25.87,0
Macedonian21,5.84,0.74,0,0.16,27.94,34.32,0.64,0.03,4.07,0.12,26.09,0.05
Macedonian3,5.71,0.48,0,0.03,24.75,42.82,0.02,0,5.45,0.06,20.68,0
Macedonian7,5.82,0,0.51,0.35,26.79,35.95,0,0,6.99,0,23.60,0
Montenegro1,5.47,0,1.35,0.29,27.51,35.26,0.71,0,5.82,0.20,23.41,0
Montenegro14,6.57,0.54,0.61,0,30.38,33.27,0,0,7.70,0,20.93,0
Montenegro15,3.48,0.87,0.56,0,28.64,35.21,0,0,6.61,0,24.63,0
Montenegro17,4.11,0,1.23,0,25.54,37.23,0.02,0,5.81,1.10,24.96,0
Montenegro19,3.56,0.53,1.05,0,28.99,35.17,0,0.09,5.63,0.17,24.82,0
Montenegro20,5.16,0.70,0.68,0.28,29.88,34.38,0.18,0,5.35,0,23.38,0
Montenegro21,4.91,0.81,0,0,28.76,33.68,0.23,0,6.63,0,24.98,0
Montenegro4,5.56,0.28,0,0.42,28.98,40.14,0,0,3.79,0,20.78,0.05
Montenegro5,5.48,1.19,0.29,0.43,28.82,38.25,0,0,5.60,0.61,19.32,0
Montenegro6,5.47,0.48,0.61,0.25,30.05,35.82,0,0,6.85,0.20,20.29,0
Montenegro9,5.99,1.24,0.43,0,28.02,35.38,0.96,0,4.82,0,23.16,0
Serbia1,3.87,0.50,0.47,0,28.19,40.13,1.11,0,4.52,0,21.21,0
Serbia10,5.52,1.41,0.79,0,28.41,33.37,0.52,0,7.09,0,22.90,0
Serbia16,4.65,1.52,0.18,0,27.60,40.31,0.14,0,4.84,0.26,20.49,0
Serbia18,0.53,1.14,0.74,0.79,26.61,37.64,1.15,0,5.43,0,25.93,0.04
Serbia19,4.53,0.66,1.11,0,26.88,40.49,0.51,0,5.61,0.19,20.02,0
Serbia2,3.95,0.88,1.37,0,28.34,35.40,1.08,0,5.53,0,23.44,0
Serbia3,3.16,0.82,0.16,0.23,25.70,39.16,0,0,4.33,0.68,25.75,0
Serbia4,5.99,0.88,0.86,0,27.69,33.32,0.25,0,5.21,0.65,25.14,0
Serbia5,4.24,1.33,0.13,0,27.73,36.76,0,0.34,3.28,0.33,25.86,0
Serbia6,6.50,0.55,0.49,0.99,25.64,39.61,0.23,0,5.81,0,20.20,0
Serbia7,4.86,1.05,1.11,0.44,27.75,37.80,0.17,0,4.40,0.45,21.96,0
Serbia9,6.32,0,0.16,0,26.15,38.03,0.49,0,5.49,0,23.36,0
Serbian_B-H11_in_Bosnia-Hertzegovina,6.32,0.91,0,0.18,24.73,43.84,1.22,0,5.15,0,17.64,0
Serbian_B-H4_in_Bosnia-Hertzegovina,3.92,0.72,0.35,0.21,28.27,43.45,0.65,0,3.67,0,18.77,0
Serbian_B-H7_in_Bosnia-Hertzegovina,2.71,0.28,0,0,28.08,41.92,0,0.05,5.06,0,21.91,0
Serbian_B-H9_in_Bosnia-Hertzegovina,4.75,0,0,0.63,28.16,41.17,0,0,5.19,1.20,18.89,0
out of curiosity Ashkenazy and Sephardic samples in our list were collected in:
ashkenazy1w Austria
ashkenazy2e Belorussia
ashkenazy2w Austria
ashkenazy3e Latvia
ashkenazy3w Austria
ashkenazy4e Latvia
ashkenazy4w France
ashkenazy5e Latvia
ashkenazy6w Germany
ashkenazy7e Poland
ashkenazy7w Germany
ashkenazy8e Poland
ashkenazy8w Netherlands
ashkenazy9e Poland
ashkenazy9w Netherlands
sephardic10tur Turkey
sephardic11bel Portugal
sephardic12bul Bulgaria
sephardic13bul Bulgaria
sephardic14bul Bulgaria
sephardic15bul Bulgaria
sephardic16bul Bulgaria
sephardic17bul Bulgaria
sephardic18bul Bulgaria
sephardic19bul Bulgaria
sephardic1tur Turkey
sephardic2tur Turkey
sephardic3tur Turkey
sephardic4tur Turkey
sephardic5tur Turkey
sephardic6tur Turkey
sephardic7tur Turkey
sephardic8tur Turkey
sephardic9tur Turkey
Not that much better:
[TABLE="class: distances"]
[TR]
[TH="align: right"]Distance to:[/TH]
[TH="align: left"]Angela[/TH]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]10.29025753[/TD]
[TD]ItalyAbruzzo21_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]11.90679638[/TD]
[TD]ItalyAbruzzo13_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]11.98841107[/TD]
[TD]TP08_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]12.71835681[/TD]
[TD]TP06_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]12.85875966[/TD]
[TD]ItalyAbruzzo22_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]12.90065115[/TD]
[TD]SR48R_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.13537209[/TD]
[TD]TP25_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.16600547[/TD]
[TD]ItalyAbruzzo17_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.45773384[/TD]
[TD]W-Sicily4_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.75745616[/TD]
[TD]ItalyAbruzzo19_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.77992017[/TD]
[TD]W-Sicily7_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.78993836[/TD]
[TD]TP04_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]13.80142022[/TD]
[TD]ItalyAbruzzo15_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]14.15748565[/TD]
[TD]ItalyAbruzzo20_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]14.25281727[/TD]
[TD]ItalyAbruzzo9_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]14.25840805[/TD]
[TD]ItalyAbruzzo14_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]14.26076085[/TD]
[TD]ItalyAbruzzo16_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]14.36989562[/TD]
[TD]ItalyAbruzzo23_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]15.08224121[/TD]
[TD]SR64_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]16.08740190[/TD]
[TD]Ag-Sicily5_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]16.16724466[/TD]
[TD]TP05_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]16.77179179[/TD]
[TD]W-Sicily1_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]16.82153382[/TD]
[TD]C-Sicily50_Behar_2013[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]16.84593126[/TD]
[TD]SR60_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]16.93869239[/TD]
[TD]W-Sicily9_Behar_2013[/TD]
[/TR]
[/TABLE]
A lot of Abruzzo is clearly more northern than the rest of the South. It makes sense. Also interesting how similar northern Puglia is to it.
What incredible variation we have in Italy. In other parts of the world they kill each other when they're genetically like 2nd cousins.
Political boundaries in Italy don't match the genetic boundaries.
Angela if you don't mind me asking, what are the ranges of those distances, from my screen looks like 11 to about 16/18, etc.
Of course I don't mind. Sorry it's hard to read: 10.29 (Abruzzi) to 16.9 (West Sicily).
I have some better West Sicily samples, though: 12-13 and:
[TABLE="class: cms_table_distances"]
[TR]
[TD="bgcolor: #0000FF, align: right"]11.98841107[/TD]
[TD]TP08_Busby_2015[/TD]
[/TR]
[TR]
[TD="bgcolor: #0000FF, align: right"]12.71835681[/TD]
[TD]TP06_Busby_2015[/TD]
[/TR]
[/TABLE]
That's 11.9 and 12.7.
There's a lot more variety in these Southern Italian samples than I expected.
Ok, these "academic samples" from Kosovo are not as weird as the Albanian ones.... some modern Serbia, Kosovo, Bosnia, Montenegro, Macedonia, ... The Genetic Structure of Western Balkan Populations Based on Autosomal and...
Code:Bosnian_10,3.06,0.44,0,0.55,27.00,42.48,0,0.33,4.98,0,21.15,0 Bosnian_11,5.64,0.03,0.96,0,25.33,42.04,0,0,4.77,0,21.23,0 Bosnian_12,5.24,0.63,0.40,0,25.12,43.50,0.64,0,5.50,0,18.96,0 Bosnian_13,5.51,0,0.23,0,25.26,41.18,1.93,0,5.16,0,20.73,0 Bosnian_14,4.40,1.23,0,0.54,25.72,42.67,0,0,4.39,0,21.04,0 Bosnian_15,5.01,0.20,1.81,0,27.25,47.94,0,0,2.84,0,14.89,0.06 Bosnian_16,5.95,0,0.44,0,27.26,39.69,0.52,0,4.98,0,21.15,0 Bosnian_2,4.84,0.29,0,0,25.16,44.53,0.93,0.14,3.38,0.19,20.54,0 Bosnian_3,5.54,0.23,0.75,0.42,26.23,39.63,0.49,0,3.24,0.09,23.39,0 Bosnian_4,4.08,1.33,0.36,0,24.07,44.11,0,0.16,4.94,0,20.95,0 Bosnian_5,4.60,0.64,0,0,26.63,44.10,1.12,0,4.45,0,18.40,0.08 Bosnian_7,4.52,1.31,0.93,0.13,23.41,44.39,0.12,0.08,5.11,0,20,0 Bosnian_8,5.01,0.62,0,0,27.23,42.26,0.73,0.08,5.04,0.09,18.95,0 Kosovo1,5.40,0.63,0.60,0,30.94,24.44,0,0,7.22,0,30.63,0.14 Kosovo11,5.19,1.12,1.28,0,28.15,27.51,0,0,7.60,0.11,29.04,0 Kosovo12,7.44,0,1.12,0,28.84,27.85,1.71,0,7.53,0,25.49,0 Kosovo14,4.96,0,0,0,31.77,28.45,0,0,5.97,0,28.85,0 Kosovo16,6.85,0,0.46,0.39,29.54,26.37,0.27,0,7.17,0,28.95,0 Kosovo18,7.62,0.02,1.15,0,26.29,28.10,0.22,0,9.87,0,26.73,0 Kosovo7,4.68,0.17,0.35,0.54,29.29,26.60,0,0.09,8.87,0,29.41,0 Kosovo8,6.84,0.11,1.01,0,28.83,25.39,0,0,6.35,0.39,31.08,0 Macedonian12,6.37,0.52,0.85,0,23.90,34.46,0,0,7.66,0,26.24,0 Macedonian17b-d,4.48,0.12,1.17,0,27.66,31.85,0,0,7.43,0.72,26.58,0 Macedonian19,5.08,0.81,0,0,28.13,33.31,0.18,0,6.54,0.08,25.86,0 Macedonian20,7.09,0,0.58,0.32,24.55,35.80,0.65,0,5.13,0,25.87,0 Macedonian21,5.84,0.74,0,0.16,27.94,34.32,0.64,0.03,4.07,0.12,26.09,0.05 Macedonian3,5.71,0.48,0,0.03,24.75,42.82,0.02,0,5.45,0.06,20.68,0 Macedonian7,5.82,0,0.51,0.35,26.79,35.95,0,0,6.99,0,23.60,0 Montenegro1,5.47,0,1.35,0.29,27.51,35.26,0.71,0,5.82,0.20,23.41,0 Montenegro14,6.57,0.54,0.61,0,30.38,33.27,0,0,7.70,0,20.93,0 Montenegro15,3.48,0.87,0.56,0,28.64,35.21,0,0,6.61,0,24.63,0 Montenegro17,4.11,0,1.23,0,25.54,37.23,0.02,0,5.81,1.10,24.96,0 Montenegro19,3.56,0.53,1.05,0,28.99,35.17,0,0.09,5.63,0.17,24.82,0 Montenegro20,5.16,0.70,0.68,0.28,29.88,34.38,0.18,0,5.35,0,23.38,0 Montenegro21,4.91,0.81,0,0,28.76,33.68,0.23,0,6.63,0,24.98,0 Montenegro4,5.56,0.28,0,0.42,28.98,40.14,0,0,3.79,0,20.78,0.05 Montenegro5,5.48,1.19,0.29,0.43,28.82,38.25,0,0,5.60,0.61,19.32,0 Montenegro6,5.47,0.48,0.61,0.25,30.05,35.82,0,0,6.85,0.20,20.29,0 Montenegro9,5.99,1.24,0.43,0,28.02,35.38,0.96,0,4.82,0,23.16,0 Serbia1,3.87,0.50,0.47,0,28.19,40.13,1.11,0,4.52,0,21.21,0 Serbia10,5.52,1.41,0.79,0,28.41,33.37,0.52,0,7.09,0,22.90,0 Serbia16,4.65,1.52,0.18,0,27.60,40.31,0.14,0,4.84,0.26,20.49,0 Serbia18,0.53,1.14,0.74,0.79,26.61,37.64,1.15,0,5.43,0,25.93,0.04 Serbia19,4.53,0.66,1.11,0,26.88,40.49,0.51,0,5.61,0.19,20.02,0 Serbia2,3.95,0.88,1.37,0,28.34,35.40,1.08,0,5.53,0,23.44,0 Serbia3,3.16,0.82,0.16,0.23,25.70,39.16,0,0,4.33,0.68,25.75,0 Serbia4,5.99,0.88,0.86,0,27.69,33.32,0.25,0,5.21,0.65,25.14,0 Serbia5,4.24,1.33,0.13,0,27.73,36.76,0,0.34,3.28,0.33,25.86,0 Serbia6,6.50,0.55,0.49,0.99,25.64,39.61,0.23,0,5.81,0,20.20,0 Serbia7,4.86,1.05,1.11,0.44,27.75,37.80,0.17,0,4.40,0.45,21.96,0 Serbia9,6.32,0,0.16,0,26.15,38.03,0.49,0,5.49,0,23.36,0 Serbian_B-H11_in_Bosnia-Hertzegovina,6.32,0.91,0,0.18,24.73,43.84,1.22,0,5.15,0,17.64,0 Serbian_B-H4_in_Bosnia-Hertzegovina,3.92,0.72,0.35,0.21,28.27,43.45,0.65,0,3.67,0,18.77,0 Serbian_B-H7_in_Bosnia-Hertzegovina,2.71,0.28,0,0,28.08,41.92,0,0.05,5.06,0,21.91,0 Serbian_B-H9_in_Bosnia-Hertzegovina,4.75,0,0,0.63,28.16,41.17,0,0,5.19,1.20,18.89,0
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0105090
Thanks Angela. Just a friendly suggestion, did you adjust your gradient when you ran the Oracle program. I just set mine to 100 to clear up the resolution. It works on my computer like a charm.
Yes, there is some variety in those Samples. In my post 958, I am closer to some Abruzzo samples than some of the ones from Sicily and closer to some areas of Sicily for which none of my Great-Grandparents (1 Grandfather) were from (3rd closest is Syracuse SR64).
As far as I recall behar samples were gathered in London and by individuals who self-reported their ethnicity (and this explains the high number of Romanian individuals with high south asian admixture), and the Busby samples are recycled from Hellenthal et al 2015 who gathered for south Italy and Sicily new samples from anonymous donours (https://www.science.org/action/downloadSupplement?doi=10.1126/science.1243518&file=hellenthal.sm.pdf), and for the same reservations expressed for some Tuscan samples I do not think all these samples represent the genuine genetic variation present in Sicilians and south Italians, and it also explains why the samples from Italian authors gathered in situ form much tighter clusters (https://www.nature.com/articles/s41598-017-01802-4 , https://www.nature.com/articles/s41598-021-82591-9 for example).
Leopoldo: Thanks for the note. Here is what I don't quite understand. I have been able to go back to Sicily and get birth, marriage and death certificates dating back to the early 1800's both Paternal and Maternal lineages.It seems to me that Italian researchers when taking a DNA sample from someone in Sicily, Puglia, Campania, Tuscany, or wherever in modern Italy can ask the Donor to provide his or her birth record, which has the parents with their family names, and then get the parents wedding civil record, which has both their parents and document that the person donating sample has family history dating back to to the 1800's which would provide a higher confidence that the donor represents a population that has long-term ties to the area (and not do to some recent migrant moving into the region with no historic ties to the region).