DNA Tutorials
Y-DNA haplogroups
MtDNA haplogroups
Regional history
Regional DNA Projects
DNA Timeline
Autosomal DNA
Other DNA pages
If you tested your DNA with a personal genomics service like 23andMe , DeCODEme , FTDNA 's Family Finder or another testing company, you can learn more about your risk factors for hundreds of diseases. Many of these SNP's are tested but not (yet) part of the report provided by personal genomics companies. This is free extra information.
We recommend that you install the SNPTips add-on for Mozilla Firefox to browse these pages. It allows you to upload your DNA results in the browser and show instantly which allele variant you have for each of the SNP listed below.
What can DNA tell you about yourself ?
List of cancers with the associated genes and alleles
Risk alleles : Substantially lower risk
(over 3x less), moderately lower risk (up
to 3x less) , normal, slightly higher
risk (up to 3x more), greatly increased risk
(over 3x more) . Normal alleles marked
with a * mean that the person is a carrier of the disease. Depending on
the testing company, sometimes A is reported as T, and G is reported as
C, or vice-versa.
Testing companies :
A = 23andMe (all versions) ; A2* = 23andMe (v2 only) ; A2 = 23andMe (v2 & v3) ; A3 = 23andMe (v3 only)
B = DeCODEme
C = FTDNA (Family Finder v2)
Bold letters indicate that the SNP is part of the official report, and is therefore likely to be more reliable.
Only SNP's in the official report and those not tested by 23andMe are listed for deCODEme. FTDNA SNP's are only mentioned when they are not tested by 23andMe.
Description
Chromosome
Gene
SNP
Risk alleles
Tested by*
Links
Cancer (general risk)
3
FHIT
Link
5
CLPTM1L
rs2736098
AA , AG ,
GG
A3
Link
rs401681
CC , CT ,
TT
A
6
E2F3
12
MDM2
rs2279744
GG , GT ,
TT
A
19
ZBTB7A
20
AURKA
rs2273535
AA, AT , TT
A3
Cancer (prevention)
B
CASP8
Cancer : Bladder
A
PTGS2
rs5275
CC , CT ,
TT
A
A
RUNX3
rs760805
AA , AT ,
TT
A3
3
3q38
rs710521
AA , AG ,
GG
A
3
OGG1
rs1052133
CC, CG, GG
A3
8
8q24 region
rs9642880
GG , GT ,
TT
1 , 2
Cancer : Brain
A
MTHFR
rs1801131
GG , GT, TT
A
rs1801133
CC, CT , TT
A
Cancer : Breast
B
CASP8
rs17468277
CC, CT , TT
A, B
rs1045485
CC , CG ,
GG
A
B
intergenic
rs13387042
AA , AG, GG
A, B
4
intergenic
rs2056116
AA, AG , GG
A3
5
intergenic
rs4700485
AA , AG ,
GG
A, B
5
MRPS30
rs4415084
AA , AG ,
GG
B
5
intergenic
rs889312
AA, AC, CC
A
6
TNF
rs361525
AA , AG ,
GG
A
6
CDKN1A
rs3176336
AA, AT, TT
A3
7
XRCC2
rs3218536
AA , AG ,
GG
A
8
intergenic
rs672888
CC , CT, TT
A, B
8
8q24
rs13281615
AA , AG ,
GG
A
8
CYP51A1
rs1042638
A
9
intergenic
rs3218005
AA, AG, GG
A3
9
CDKN2A
rs3731239
CC , CT, TT
A
10
FGFR2
rs1219648
AA, AG , GG
A
rs2981582
CC, CT , TT
A, B
rs2420946
CC, CT , TT
A
rs2981582
CC, CT , TT
A
10
TCF7L2
rs12255372
GG, GT, TT
A
11
LSP1
rs3817198
CC , CT, TT
A, B
11
ATM
rs3218707
CC , CG ,
GG
A3
rs4987945
CC, CG , GG
C
rs4986761
CC , CT ,
TT
A3
rs3218695
AA , AC ,
CC
A3
rs1800056
CC , CT ,
TT
A
rs1800057
CC, CG , GG
A3
rs3092856
CC, CT , TT
A3
rs1800058
CC, CT , TT
A
rs1801673
AA, AT , TT
A3
12
CDKN1B
rs34330
CC, CT, TT
A
13
BRCA2
rs1799954
CC, CT , TT
A
rs766173
GG , GT ,
TT
A
rs144848
GG , GT ,
TT
A
rs4987117
CC, CT , TT
A
rs1799954
CC, CT , TT
A
rs11571746
CC , CT ,
TT
A
rs11571747
AA, AC , CC
A3
rs4987047
AA, AT , TT
A
rs11571833
AA, AT , TT
A3
rs1801426
AA, AG , GG
A3
i4000379
DD , DI ,
II
A
16
16q12 region
rs3803662
CC, CT , TT
A, B
17
BRCA1
rs1799950
AA, AG , GG
A
rs4986850
AA , AG ,
GG
A
rs2227945
AA, AG , GG
A
rs16942
AA, AG , GG
A
rs1799966
AA, AG , GG
A
i4000377
DD , DI ,
II
A
i4000378
DD, DI , II
A
17
TP53
rs1042522
CC, CG, GG
A
19
CCNE1
rs997669
AA, AG, GG
A
20
AURKA
rs2273535
AA, AT, TT
A3
rs1047972
CC, CT, TT
A
22
COMT
rs4680
AA , AG ,
GG
A
22
CHEK2
rs17879961
CC , CT ,
TT
A
Cancer : Cervical
6
CD83
rs853360
A3
rs9296925
A3
rs9370729
A3
rs9230
rs750749
A3
Cancer : Colorectal
7
LEP
rs2167270
AA , AG, GG
A
8
POU5F1P1
rs6983267
GG , GT ,
TT
A, B
8
EIF3H
rs16892766
AA, AC , CC
A, B
8
intergenic
rs10505477
AA , AG, GG
A
9
intergenic
rs719725
AA , AC ,
CC
A
10
TCF7L2
rs7903146
CC, CT , TT
A
10
intergenic
rs10795668
AA , AG ,
GG
A, B
11
LOC120376
rs3802842
AA, AC , CC
A, B
12
CHFR
rs2306536
CC, CT, TT
A
12
KLRK1
rs1049174
CC, CG , GG
15
intergenic
rs4779584
CC, CT , TT
A, B
18
SMAD7
rs4939827
CC , CT, TT
A, B
rs12953717
CC, CT , TT
A
rs4464148
CC , CT ,
TT
A
19
INSR
rs1864010
AA , AG ,
GG
20
AURKA
rs2273535
AA, AT, TT
A3
rs1047972
CC, CT, TT
A
Cancer : Endometrial (Uterus)
12
MDM2
rs2279744
GG , GT, TT
A
22
COMT
rs4633
CC, CT , TT
A
rs4680
AA, AG , GG
A
Cancer : Gallbladder
3
OGG1
rs1052133
CC, CG, GG
4
EGF
rs4444903
AA, AG, GG
A
Cancer : Gastric (Stomach)
A
MTHFR
rs1801133
CC, CT , TT
A
8
PSCA
rs2294008
CC, CT, TT
A
17
MPO
rs2333227
CC, CT , TT
A3
20
AURKA
rs1047972
CC, CT, TT
A
Cancer : Leukemia (Blood)
B
ACOXL
rs17483466
AA, AG , GG
A
B
SP140
rs13397985
GG , GT ,
TT
A
6
IRF4
rs872071
AA, AG , GG
A
11
intergenic
rs735665
AA , AG ,
GG
A
15
intergenic
rs7176508
AA , AG ,
GG
A3
19
PRKD2
rs11083846
AA , AG ,
GG
A
Cancer : Liver
4
EGF
rs4444903
AA, AG , GG
A
6
TNF
rs1800629
AA , AG ,
GG
A
6
HFE
rs1800562
AA , AG ,
GG
A
Cancer : Lung
A
MTHFR
rs1801133
CC, CT , TT
A
Link
6
CDKN1A
rs1801270
AA, AC , CC
A
7
ABCB1
rs3842
CC , CT ,
TT
A2*
15
CHRNA3
rs1051730
CC, CT , TT
A, B
15
LOC123688
rs8034191
CC , CT ,
TT
A
16
ABCC1
rs212090
AA , AT ,
TT
A
17
MPO
rs2333227
CC, CT , TT
A3
20
AURKA
rs2273535
AA, AT, TT
A3
22
CHEK2
rs17879961
CC , CT ,
TT
A
Cancer : Oral and Larynx
4
ADH7
rs1573496
CC. CG , GG
A
4
ADH1B
rs1229984
AA , AG ,
GG
Cancer : Ovarian
B
SRD5A2
rs523349
CC, CG , GG
A
SNPedia
7
PMS2
rs7797466
A
7
XRCC2
rs3218536
AA , AG ,
GG
A
11
PGR
rs1042838
GG, GT , TT
A
11
intergenic
rs608995
A3
13
RB1
rs4151620
CC, CG , GG
A
rs2854344
AA , AG ,
GG
A
13
P2RY5
rs2227311
CC , CT ,
TT
A
Cancer : Pancreatic
3
ATR
rs2227928
CC , CT ,
TT
A
4
PALLD
5
MTRR
rs162049
A3
rs10380
CC, CT, TT
A
11
ATM
rs1801516
AA , AG, GG
A
rs664143
CC , CT, TT
A
11
CHEK1
rs521102
CC, CT, TT
17
LIG3
rs2074522
CC, CT, TT
A3
Cancer : Prostate
B
EHBP1
rs2710646
AA , AC, CC
A, B
3
FYCO1
rs1545985
AA, AG , GG
A
rs7652331
CC, CT, TT
A
4
KIAA1211
rs629242
CC, CT , TT
A
4
LOC152485
rs13149290
CC , CT, TT
A
5
FCHSD1
rs251177
CC , CT ,
TT
A
5
FGFR4
rs351855
CC, CT, TT
A
7
JAZF1
rs10486567
A
8
8q24(1)
rs1447295
AA , AC ,
CC
A, B
8
8q24(2)
rs6983267
GG , GT ,
TT
A, B
8
8q24(3)
rs10505483
AA , AC, CC
A, B
8
8q24
rs16901979
AA , AC ,
CC
A
9
DAB2IP
rs1571801
GG, GT, TT
A
10
intergenic
rs10993994
CC, CT , TT
A, B
10
TCF7L2
rs12255372
GG, GT, TT
A
11
intergenic
rs10896449
AA, AG, GG
A, B
12
VDR
rs2107301
CC, CT, TT
A
rs2238135
CC, CG, GG
A3
13
FAM124A
rs10492519
AA, AG , GG
A
14
ESR2
rs2987983
CC, CT , TT
A
16
CDH1
rs16260
AA , AC ,
CC
A
17
TCF2
rs4430796
AA , AG, GG
A, B
17
17q24.3
rs1859962
GG , GT, TT
A, B
X
intergenic
rs5945572
A , G
A, B
Cancer : Skin (basal cell carcinoma)
A
PADI6
rs7538876
AA , AG ,
GG
A, B
A
intergenic
rs801114
GG , GT ,
TT
A, B
Cancer : Skin (melanoma)
A
IL6R
rs6684439
CC, CT , TT
A
rs4845622
AA, AC , CC
B
rs4845618
GG, GT , TT
A3
rs8192284
AA, AC , CC
A
9
intergenic
rs1408799
CC, CT , TT
A
9
CDKN2A
12
CDK4
13
BRCA2
rs1799944
AA, AG , GG
A
16
MC1R
Cancer : Skin (red hair)
16
MC1R
rs1805009
CC , CG, GG
rs1805008
CC, CT, TT
A
rs1805007
CC, CT, TT
A
Cancer : Skin (light sensitivity)
20
intergenic
rs1015362
AA, AG , GG
A
rs4911414
GG, GT , TT
A
Cancer : Testicular
5
SPRY4
rs4624820
AA , AG ,
GG
A, B
Link
6
BAK1
AA, AG , GG
A, B
12
KITLG
rs995030
AA, AG , GG
A, B
X
TGCT1
Cancer : Thyroid
9
intergenic
rs965513
AA , AG ,
GG
A
Link
14
intergenic
rs944289
CC , CT ,
TT
A
Neuroblastoma
6
6p22
rs6939340
AA , AG, GG
A
rs4712653
CC , CT, TT
A
rs9295536
AA , AC, CC
A
Non-Hodgkin
Lymphoma
4
TLR6
rs5743815
CC , CT ,
TT
A3
SNPedia
6
BAT2
rs3132453
A
12
SELPLG
rs7300972
A3
19
B3GNT3
rs36686
A
22
UNC84B
rs2072797
CC, CT , TT
A
Please enable JavaScript to view the comments powered by Disqus.